2D3V,1G0X,1OLL,1OVZ,1OW0,1P6F,2GI7


Conserved Protein Domain Family
IgC2_D1_D2_LILR_KIR_like

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cd16843: IgC2_D1_D2_LILR_KIR_like 
Immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors, Natural killer inhibitory receptors (KIRs) and similar domains; member of Immunoglobulin Constant-2 set of IgSF domains
The members here are composed of the first and second immunoglobulin (Ig)-like domains found in Leukocyte Ig-like receptors (LILRs), Natural killer inhibitory receptors (KIRs, also known as also known as cluster of differentiation (CD) 158), and similar proteins. This group includes LILRB1 (also known as LIR-1), LILRA5 (also known as LIR9), an activating natural cytotoxicity receptor NKp46, the immune-type receptor glycoprotein VI (GPVI), and the IgA-specific receptor Fc-alphaRI (also known as cluster of differentiation (CD) 89). LILRs are a family of immunoreceptors expressed on expressed on T and B cells, on monocytes, dendritic cells, and subgroups of natural killer (NK) cells. The human LILR family contains nine proteins (LILRA1-3, and 5, and LILRB1-5). From functional assays, and as the cytoplasmic domains of various LILRs, for example LILRB1, LILRB2 (also known as LIR-2), and LILRB3 (also known as LIR-3) contain immunoreceptor tyrosine-based inhibitory motifs (ITIMs), it is thought that LIR proteins are inhibitory receptors. Of the eight LIR family proteins, only LILRB1, and LILRB2, show detectable binding to class I MHC molecules; ligands for the other members have yet to be determined. The extracellular portions of the different LIR proteins contain different numbers of Ig-like domains for example, four in the case of LILRB1, and LILRB2, and two in the case of LILRB4 (also known as LIR-5). The activating natural cytotoxicity receptor NKp46 is expressed in natural killer cells, and is organized as an extracellular portion having two Ig-like extracellular domains, a transmembrane domain, and a small cytoplasmic portion. GPVI, which also contains two Ig-like domains, participates in the processes of collagen-mediated platelet activation and arterial thrombus formation. Fc-alphaRI is expressed on monocytes, eosinophils, neutrophils, and macrophages; it mediates IgA-induced immune effector responses such as phagocytosis, antibody-dependent cell-mediated cytotoxicity and respiratory burst. Killer cell immunoglobulin-like receptors (KIRs; also known as CD158 for human KIR) are transmembrane glycoproteins expressed by natural killer cells and subsets of T cells. KIRs are a family of highly polymorphic activating and inhibitory receptors that serve as key regulators of human NK cell function. The KIR proteins are classified by the number of extracellular immunoglobulin domains (2D or 3D) and by whether they have a long (L) or short (S) cytoplasmic domain. KIR proteins with the long cytoplasmic domain transduce inhibitory signals upon ligand binding via an immune tyrosine-based inhibitory motif (ITIM), while KIR proteins with the short cytoplasmic domain lack the ITIM motif and instead associate with the TYRO protein tyrosine kinase binding protein to transduce activating signals. The major ligands for KIR are MHC class I (HLA-A, -B or -C) molecules.
Statistics
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PSSM-Id: 409518
Aligned: 14 rows
Threshold Bit Score: 103.999
Created: 17-Aug-2016
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #####                                                                          
2D3V_A      5 KATLWAEPGSVISRGNSVTIRCQgtl-eaQEYRLVKegsp--epwDTQNplep--knkARFSIPSxtehHAGRYRCYYYs 79  human
1G0X_A      4 KPTLWAEPGSVITQGSPVTLRCQggq-etQEYRLYRekkt--apwITRIpqel--vkkGQFPIPSitweHAGRYRCYYGs 78  human
1OVZ_A    104 KPFLSADRGLVLMPGENISLTCSsahipfDRFSLAKegel-slpqHQSGeh------pANFSLGPvdlnVSGIYRCYGWy 176 human
1OW0_C      7 MPFISAKSSPVIPLDGSVKIQCQair-eaYLTQLMIiknstyreiGRRLkfwn--etdPEFVIDHmdanKAGRYQCQYRi 83  human
2GI7_A      8 KPSLQALPSSLVPLEKPVTLRCQgpp-gvDLYRLEKls-----ssRYQDq--------AVLFIPAmkrsLAGRYRCSYQn 73  human
BAD08447   27 IPIISTATNPMVSWNESVRILCRgtp-eaFLYQLSLmkn----stQTVIekklgfqkeAEFIINHmnstLAGCYQCQYRk 101 Norway rat
BAD14958   28 IPIISAVPSSVIPLNESVKILCQgtp-qsFLYQLEIlgn----stNKMVeekygfqkeAEFIINHmdtkTAGRYQCRYRk 102 horse
P04217    402 RPQLRATWSGAVLAGRDAVLRCEgpi-pdVTFELLReget--kavKTVRtpg----aaANLELIFvgpqHAGNYRCRYRs 474 human
P04217     28 QPSLWAESESLLKPLANVTLTCQarl-etPDFQLFKngv----aqEPVHldsp--aikHQFLLTGd---TQGRYRCRSGl 97  human
CAG25957   25 RPSLSLHPSQGVSLQDAVTLRCHlpr-laAWVWLYQeg-----gwSYTKgkek-eqnaAEFFFVStkreHAGRYRCQYRl 97  chicken
Feature 1                       
2D3V_A     80 pa---gwSEPSDPLELVV 94  human
1G0X_A     79 dt--agrSESSDPLELVV 94  human
1OVZ_A    177 nrspylwSFPSNALELVV 194 human
1OW0_C     84 gh---yrFRYSDTLELVV 98  human
2GI7_A     74 gs---lwSLPSDQLELVA 88  human
BAD08447  102 kn---hwSEQSKPLKLVV 116 Norway rat
BAD14958  103 ay---rwSKYSEALQLVV 117 horse
P04217    475 wvphtfeSELSDPVELLV 492 human
P04217     98 st---gwTQLSKLLELTG 112 human
CAG25957   98 sws-aevSVKSDPVELVP 114 chicken

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