6CNM


Conserved Protein Domain Family
SK_channel

?
pfam03530: SK_channel 
Click on image for an interactive view with Cn3D
Calcium-activated SK potassium channel
Statistics
?
PSSM-Id: 460958
Aligned: 26 rows
Threshold Bit Score: 91.5044
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6CNM_A        12 LRRRKRLLEQE-KSLAGWALVLAGTGIGLMVLHAE-------------------------MLWFGG----CSWALYLFLV 61 
5_pfamImport   2 VPEQRMMLVRSqRQHTSFQLFFGGFGVVLMMVQMEylwfintqtlpstcpmesttqcplcFEALGTsvpvSEGRMVLLAL 81 
EKC32236     455 LSRRKQLLRYR-TIVVNFEFSFALLGIVLMLIETE-------------------------LFFQGVi---SKSSVASIVL 505
EKC41352      85 LYSRKQLIERR-TKVVDASFVLGIIGIVANVIETE-------------------------LRYGGI-----SSTTESVIL 133
EKC41351      53 IEYRRELLHRR-RRIVDTEFTLAMIGIVLMVVETE-------------------------LFISYGm---EKVSIASIVL 103
XP_003118211 255 YRVRSERLTNR-VRITDRSLYLALFGVILMLVESE-------------------------ITAERIyg-vSKAHWISQSL 307
NP_001256595  11 WKIRRRLSDLK-VKLCDATLILAVGGLILAMLDVE-------------------------FTATRIlesfVNTSDLSFIL 64 
XP_002638621 163 SQNRKKTQLKKcGRVCDISLFLAVLGLILVIIDSE-------------------------LTALSDstgvTKASPISVTL 217
XP_002639529 461 LIRREHLHEKR-RSVSDKALAFAVIGIILMIIENE-------------------------LRTGLLi---RPGSFLSQTL 511
6_pfamImport   2 LIRREYLHEKR-RMVCDKALAFAIMGIILMIIENE-------------------------LRSSNMi---KTESSFSHFL 52 
6CNM_A        62 KCTISISTFLLLCLIVAFHAKEVQLFMTDNGLRDWRVALTGR-QAAQIVLELVVCGLHPAP 121
5_pfamImport  82 RILITFSTALMLYYIYLYYAAECEVMKLKNIVPPKATLMSSS-LRRTLLIEMAVLGIHPFP 141
EKC32236     506 KSCITLSTVFLLVAVVGYHVTGIQLCMTDNSLEDWRLAVTFPwTYLKILLELCVCIIHPIP 566
EKC41352     134 RIVTSVTSVLLVASVVVYNLIGIKLQLITAGLENWRLVINYS-IIIKVLTEVLICSIHPLP 193
EKC41351     104 KTIISVTTVILLFCICLNYYTGAKIKMVDAGLKEWYMATSYW-HWFGLVLELLICSIHPIP 163
XP_003118211 308 RVGVTCSTIVLLYHIILYHLNDIVLELVDCGADDWRVVVTTE-RIIQFCIEFICCAICPLP 367
NP_001256595  65 RTAAIITTIALLFFLLFYHFIDIKIQLVETGTSNWRVGITSE-RVLNTLLEVAICAICPIP 124
XP_002638621 218 RSACVVSTFFLICCLVNYHAIEVKIALIDSGADDWRVAFSTD-RFVKMLIEVLVCMICPFP 277
XP_002639529 512 KLSILATTAILLSFVGYFHVIEIQLFMNANAAEDWMVALSFR-RIYQICLELFICMLCPIP 571
6_pfamImport  53 KVCIIGTTTALLTFVGYFHVIEIQLFMNANAADDWMVALTLR-RFFQIGLELLICMLCPLP 112
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap