Conserved Protein Domain Family
ChlamPMP_M

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pfam07548: ChlamPMP_M 
Chlamydia polymorphic membrane protein middle domain
This family contains several Chlamydia polymorphic membrane proteins. Chlamydia pneumoniae is an obligate intracellular bacterium and a common human pathogen causing infection of the upper and lower respiratory tract. This domain is found between the beta-helical repeats (pfam02415) and the C-terminal pfam03797. This domain is excised subsequent to secretion.
Statistics
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PSSM-Id: 311484
Aligned: 8 rows
Threshold Bit Score: 136.124
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O84419 1202 GSLVLKPNTELHVIS--FEQKeGSSLVMTPGSVLSNQ-------------------------------------TVADGA 1242 Chlamydia trachomat...
O84417  499 GTLSIENGAHLIVQS--FKQT-GGRISLSPGSSLALYtmnsf----------------------------fhgnISSKEP 547  Chlamydia trachomat...
P38008  489 GTLAIEDDAELEIFNipFTQNpTSLLALGSGATLTVG---------------------------------------KHGK 529  Chlamydia trachomat...
O84877  460 GFLCIEDHAQLTVNR--FTQT-GGVVSLGNGAVLSCYkng-------------------------------tgdSASNAS 505  Chlamydia trachomat...
O84879  520 GRIVLREKAKLSVNS--LSQT-GGSLYMEAGSTLDFVtpqp-----------------------------pqqpPAANQL 567  Chlamydia trachomat...
O84818 1000 GSLELLNGATLCSYG--FKQDaGAKLVLAAGAKLKILdsgtpvqqghaiskpeaeiesssepegahslwiaknaQTTVPM 1077 Chlamydia trachomat...
O84418 1226 GTLVLKEKTELHVVS--FEQKeGSKLIMKPGAVLSNQ-------------------------------------NIANGA 1266 Chlamydia trachomat...
O84880  515 GELVVTEGATLTTGT--ITAT-SGRVTLGSGASLSAVag----------------------------------aANNNYT 557  Chlamydia trachomat...
O84419 1243 LVINNMTIDLSSVEKNgiaegniftppelriidtttggsggtpstdsesnqnsddteeqnnndasnqgesangssspava 1322 Chlamydia trachomat...
O84417  548 LEINGLSFGVDISPSN---------------------------------------------------------------- 563  Chlamydia trachomat...
P38008  530 LNITNLGVILPIILKEgksppcirvnp----------------------------------------------------- 556  Chlamydia trachomat...
O84877  506 ITLKHIGLNLSSILKSgaeipll--------------------------------------------------------- 528  Chlamydia trachomat...
O84879  568 ITLSNLHLSLSSLLANnavtnppt-------------------------------------------------------- 591  Chlamydia trachomat...
O84818 1078 VDIHTISVDLASFSSSqqe------------------------------------------------------------- 1096 Chlamydia trachomat...
O84418 1267 LVINGLTIDLSSMGTPqageifsppelrivattssasg---------------------------------------gsg 1307 Chlamydia trachomat...
O84880  558 CTVSKLGIDLESFLTPn--------------------------------------------------------------- 574  Chlamydia trachomat...
O84419 1323 aahtsrtrnfaaaatatptTTPTATTtTSNQVILGG-EIKL--IDPNGTFFQNPAL-RSDQQISLLVL----------PT 1388 Chlamydia trachomat...
O84417  564 -------------------LQAEIRA-GNAPLRLSG-SPSI--HDPEGLFYENRDTaASPYQMEILLTsdkivdiskfTT 620  Chlamydia trachomat...
P38008  557 --------qdmtqntgtgqTPSSTSSiSTPMIIFNG-RLSIv-DENYESVYDSMDLsRGKAEQLILSIet-------tND 619  Chlamydia trachomat...
O84877  529 -------------wveptnNSNNYTAdTAATFSLSDvKLSLi-DDYGNSPYESTDLtHALSSQPMLSIse-------aSD 587  Chlamydia trachomat...
O84879  592 ------------nppaqdsHPAIIGStTAGSVTISG-PIFF--EDLDDTAYDRYDWlGSNQKIDVLKLqlgtqpsanaPS 656  Chlamydia trachomat...
O84818 1097 -----------------gtVEAPQVIvPGGSYVRSG-ELNLelVNTTGTGYENHALlKNEAKVPLMSFvasgdeasaeIS 1158 Chlamydia trachomat...
O84418 1308 vsssiptnpkrisaaapsgSAATTPTmSENKVFLTG-DLTL--IDPNGNFYQNPML-GSDLDVPLIKL----------PT 1373 Chlamydia trachomat...
O84880  575 -------------------YKTAILGaDGTVTVNSGsTLDLv-MESEAEVYDN-PLfVGSLTIPFVTL----------SS 623  Chlamydia trachomat...
O84419 1389 DSSKMqaqkiv--ltgdiAPQKGYTGTLTLDPDQL-------------------QNGTISVLWKF 1432 Chlamydia trachomatis D/UW-3/CX
O84417  621 DSLVT-------------NKQSGFQGAWHFSWQPNtin--------------ntKQKILRASWLP 658  Chlamydia trachomatis D/UW-3/CX
P38008  620 GQLDSnwqssl-ntsllsPPHYGYQGLWTPNWITT----------------------TYTITLNN 661  Chlamydia trachomatis D/UW-3/CX
O84877  588 NQLQSenidf----sglnVPHYGWQGLWTWGWAKTqdpepassatitdpqkanrFHRTLLLTWLp 648  Chlamydia trachomatis D/UW-3/CX
O84879  657 DLTLGn-----------eMPKYGYQGSWKLAWDPNta---------------nnGPYTLKATWTK 695  Chlamydia trachomatis D/UW-3/CX
O84818 1159 NLSVSdlqihv-vtpeieEDTYGHMGDWSea---------------------kiQDGTLVISWNP 1201 Chlamydia trachomatis D/UW-3/CX
O84418 1374 NTSDVqvydlt--lsgdlFPQKGYMGTWTLDSNPQ--------------------TGKLQARWTF 1416 Chlamydia trachomatis D/UW-3/CX
O84880  624 SSASNgvtknsvtindadAAHYGYQGSWSADWTKPplapdak------gmvppntNNTLYLTWRP 682  Chlamydia trachomatis D/UW-3/CX
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