4KJM,2JNK


Conserved Protein Domain Family
FIVAR

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pfam07554: FIVAR 
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FIVAR domain
This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Swiss:O82833, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.
Statistics
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PSSM-Id: 400096
Aligned: 204 rows
Threshold Bit Score: 30.3651
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4KJM_A    5 GNLQTAINDKSGTL--AsQNFLDADEQKRNAYNQAVSAA-------ETILNKQTGPNTAKTAVEQALNNVNNAKHALN 73   Staphylococcus aureus...
Q8NWQ6 2782 TKLDEEINKSVTTDgmTqSSIQAYENAK-RAGQTESTNA-------QNVI---NNGDATDQQIAEEKTKVEEKYNSLK 2848 Staphylococcus aureus...
Q8CP76 2583 NRLESKINETVQTDgmTqQSVENYKQAK-IKAQNESSIA-------QTLI---NNGDASDQEVSTEIEKLNQKLSELT 2649 Staphylococcus epider...
Q8CP76 3430 LNLENKINQTVQTDgmTqQSIEAYQNAK-RVAQNESNTA-------LALI---NNGDADEQQITTETDRVNQQTTNLT 3496 Staphylococcus epider...
Q8CP76 3597 RQLQDEIDQGTNTDg--------mTQDSVDNYNDSLSAAiiekgkvNKLLKRN----PTVEQVKESVANAQQVIQDLQ 3662 Staphylococcus epider...
Q8CP76 3680 NRLENSINQQTDTDgmTqDSLNNYNDKL-AKARQNLEKI-------SKVL----GGQPTVAEIRQNTDEANAHKQALD 3745 Staphylococcus epider...
Q8NWQ6 2866 TQLQNDIDQPTSTTgmT-STSIAAFNEKLSAARTKIQEI-------DRVLASH----PDVATIRQNVTAANAAKTALD 2931 Staphylococcus aureus...
Q8CP76 2667 NQLQANIDQKPSTDgmT-QQSVQSYERKLQEAKDKINSI-------NNVLANN----PDVNAIRTNKVETEQINNELT 2732 Staphylococcus epider...
Q8NWQ6 2949 NQLQHSIDTQTSTTgmT-QDSINAYNAKLTAARNKIQQI-------NQVLAGS----PTVEQINTNTSAANQAKSDLD 3014 Staphylococcus aureus...
Q8NWQ6 3032 TQLEQSINQPTDTTgmT-TASLNAYNQKLQAARQKLTEI-------NQVLNGN----PTVQNINDKVTEANQAKDQLN 3097 Staphylococcus aureus...
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