5A1U


Conserved Protein Domain Family
Coatamer_beta_C

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pfam07718: Coatamer_beta_C 
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Coatomer beta C-terminal region
This family is found at the C-terminus of the coatamer beta subunit proteins (Beta-coat proteins). This C-terminal domain probably adapts the function of the N-terminal pfam01602 domain.
Statistics
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PSSM-Id: 462245
Aligned: 75 rows
Threshold Bit Score: 149.988
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5A1U_G        682 PDDPISFMQLTAKNEMNCKEd-------qFQLSLLAA-----MGNtqrKEAADPLA--------------SKLNKVTQLT 735 
CAM67517      702 IDTPVVFSQLSEGKDAVFELe--------ATAEGPGAaakgeGSE---RK-AQLFL--------------KKLEDTMPLS 755 
Q4GYW5        692 VDTPVMFTQIMEGKGSLLELe--------AVDDLGSVva--nASI---EK-TEEFL--------------IKLEKTVPLS 743  Trypanosoma b...
Q4DQP3        689 IDTPIIFTQLAQGKDAFLELe--------ATDDLGSAia--nASI---DK-TEEFL--------------KRLEKTIPLS 740  Trypanosoma c...
XP_002140133  707 pftTLNFRQLKEKVMLSGYdl------lqVEDDIDQY--------------EDPFKictknpnntdiidcNSLKRIYPIT 766 
Q1EQ38        634 IDEKIHYEIFNTADEEENEEkesrieqikGERKL------------------------------------ERLNNIVQLT 677  Entamoeba his...
A0BYB4        637 PDDPIIIRQLKGVS---------------EFNEIDLAddetsVAT---KQEENTYV--------------SRLGHIVQLT 684  Paramecium te...
Q23JD9        691 PDDLIVIRALKGKQAEIGDLd-------lQDEEINQIefkgvGE-------DNDFA--------------SKLNKLVQLT 742  Tetrahymena t...
EEC47781      693 ADDLIHFRQLK-SMAVQAGDld-----ldDGSDLARA-----TGY---DNAGSLLS--------------SELSHVYQLS 744 
CBJ27676      684 PDDLINFRQLR-SNALQAAEld-----iyDGDDISKA-----TGM---DAPD---T--------------GRLSHIYQLS 732 
5A1U_G        736 GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGD--LKLVEKPSPLT-LAPHDFANIKANVKVASTENG 812 
CAM67517      756 GFNDPVYCEASITVHQFDVSVDWLLVNCTSKQLTNLTIELVSLGG--MKLCERPQTYT-LNPHETIAVRTSLKVSATESG 832 
Q4GYW5        744 GFCDPLYCEASVTVHQFDITVDWYIANCTANVLRDVSIELTPLGS--MKLCERPQVHT-IQPHGSVRIRTALKVGSPETG 820  Trypanosoma b...
Q4DQP3        741 GFCDPVYCEASVTVHQFDVSVDWYLVNKTSNLMQELTIELASLGG--MKLCERPQVHS-LPPHGSLKLRTALKVSSTETG 817  Trypanosoma c...
XP_002140133  767 GLDDPVYIEVIVQVQQHDVLLELIIMNRANTALQNIQIEIYPYGN--LQIVEKPQNINhLDPSEVVHLYSTVQVQSIETG 844 
Q1EQ38        678 GYSDPFYIEAIVTVTHFDITLDCLIMNQTPSTLQNITIELIPHGG--MTVKTKPSPVT-LGPGDFVRVSLGVKVDATTVG 754  Entamoeba his...
A0BYB4        685 GYCDPIYAEAFVNVHKYDIQFEVLMVNRWSKMVQNVQVEFRTQGE--SKVIEKAQGVI-LQPNQSARVRTTIKFSSQDIG 761  Paramecium te...
Q23JD9        743 GYSDPIYAESFVYIHKYDIQFETLLINRTTKPLQKVQIEFFTQENdqKRVIEKAQAVT-LQPNQSAYVKTSLKFTSIDIG 821  Tetrahymena t...
EEC47781      745 GFADPVYAEALVTVHDYDIVLEILVINRTPNTLANLTVELATMGD--MKIVERPQAHT-IGPLDQVTIRASIKVSSTETG 821 
CBJ27676      733 GFADPVYAEACVTVHDYDIVLEMLVINRTPNTLTNLTVELSTMGD--LRLVERPQSHT-IGPLDSRNIRANIKVSSTETG 809 
5A1U_G        813 IIFGNIVYDV 822 
CAM67517      833 VIYGTVLYDA 842 
Q4GYW5        821 VICASVLYEG 830  Trypanosoma brucei
Q4DQP3        818 VIYASVLYDA 827  Trypanosoma cruzi
XP_002140133  845 ILFGFVTFQL 854 
Q1EQ38        755 VISGYVNYDI 764  Entamoeba histolytica
A0BYB4        762 VVYGAIHYEN 771  Paramecium tetraurelia
Q23JD9        822 VIFGAINYEN 831  Tetrahymena thermophila SB210
EEC47781      822 HIFGTIVYED 831 
CBJ27676      810 HIFGTIVYEN 819 
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