Conserved Protein Domain Family
RED_N

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pfam07808: RED_N 
RED-like protein N-terminal region
This family contains sequences that are similar to the N-terminal region of Red protein. This and related proteins contain a RED repeat which consists of a number of RE and RD sequence elements. The region in question has several conserved NLS sequences and a putative trimeric coiled-coil region, suggesting that these proteins are expressed in the nucleus. The function of Red protein is unknown, but efficient sequestration to nuclear bodies suggests that its expression may be tightly regulated of that the protein self-aggregates extremely efficiently.
Statistics
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PSSM-Id: 462273
Aligned: 25 rows
Threshold Bit Score: 139.379
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002952015  55 DKSNAE-DAEDDGAPKYRDRAEERRRGKN-LDY------------EDASAVlSALSGSGGVGGDAG--GDLGTVDLSKLS 118
XP_009028213  74 LKKEED-EKEKELAGKYRDRAKERREGANtADP------------NQTAEV-STTANYRAVAPDID--AGANLAKHRQQL 137
XP_011623112  13 ARRKEE-KQDEPELPKYRDRAKERREDQN-PDY------------EP-----TELGSFHAVAPPGT--VDLRIADAHKIS 71 
XP_003546528  14 IRRKEE-KPEEPEVPKYRDRAKERREDQN-PDY------------EQ-----TELG-FHAVAPPGT--VDIRSSDAHKLS 71 
O48713        13 ARRREE-KLEESDNPKYRDRAKERRENQN-PDY------------DP-----SELSSFHAVAPPGA--VDIRAADALKIS 71  thale cress
XP_003577889  17 ARRKEEnKKEEPETPRYRDRAKERREDQN-PDY------------EP-----TELGSFHAVAPPGApgADLRLADAQKIS 78 
EGT35793      72 EADEDE-AHLKNILKNYRDRAAERRKQGDvSTQntlnynlidffqEKEDTT-KLTAAYRAVPGDAR--TAQDQADLRKQA 147
Q9N4U5        73 EADEDE-AALKNILKNYRDRAAERRKQGD----------------EKEDPS-KLTAAYRAVPGDAR--SAQDQADLRKQA 132 Caenorhabditis ...
XP_002117518 120 EKSEED-QWKKEIANKYRDRAKERRDGVD-TDY------------QNAAS--HTDTRYRTIGPLGE--SGDSAAERRIKE 181
XP_015789168  84 sKKQEE-GVLSELSKKYRDRAKERRDGAN-PDY------------QNEDPV-KSMEAYRAVAPDFK--STFDAAERRKRM 146 two-spotted spi...
XP_002952015 119 EEETKYLGGDMRFTHLVKGLDYALLHKTRTEITKKKDDdgdGDDDEgraggGADAGSKAEAArdaqaraNARANAASAag 198
XP_009028213 138 IQESKFLGGDMEHTHLVKGLDYALLEKVKAEIISKEQE---EEMALlektlDKQLVLAFTAIsfsvhplQT-----SE-- 207
XP_011623112  72 IENSKYLGGDLEHTHLVKGLDYALLHKVRSEIDKKPEQ---EEEVD-----------------------GKTRGSKDD-- 123
XP_003546528  72 IEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPET---GDDVE-----------------------GKSRSAKED-- 123
O48713        72 IENSKYLGGDVEHTHLVKGLDYALLNKVRSEIVKKPDG---EDGDG-----------------------GKTSAPKED-- 123 thale cress
XP_003577889  79 IEKSKYLGGDLEHTHLVKGLDFALLNKVRSEIDKKPDA---EDGKD-----------------------AKARETKED-- 130
EGT35793     148 ILESKYLGGDLEHTHLVKGLDYSLLNKVRSEMTAEDEE---DDEDM------EALETKAAAKpseasslTQELAQSQS-- 216
Q9N4U5       133 ILESKYLGGDLEHTHLVKGLDYSLLNKVRSEIDKSDDD---DDDDIdtafdEKVTSSSSSSKpseasllAQELAQSHS-- 207 Caenorhabditis ...
XP_002117518 182 IQESKYLGGDMEHTHLVKGLDFALLQKVREQMTTDERDeiiEEEDLstqnkVKQVET----------------------- 238
XP_015789168 147 IEESKFLGGDIKHTHLVKGLDYALLHKVKAELVEKDDD---NDDEE--------------EEkirgrhrRSSESDSK--- 206 two-spotted spi...
XP_002952015 199 rkEEVRFTAPLARSVFN--TLFSAPRAN-VREMYLPRRTAFVYDFDNEdSLDTDIPTTLRRPKSECPpAVE-TLFAGMDD 274
XP_009028213 208 --DQITFRTKLARNIFRalPKNPNRPIE-RNDLFIPGRMCYIVDLEENeENDTDIPTTLIRSKADCA-NMEtMTTLSNND 283
XP_011623112 124 --QPLSFRTATAKSVYEw-IVKPQTVVK-TNEMFLPGRMAFVFDMEED--YAHDIPTTVHRSKADCP-VPQeMVTVSVDG 196
XP_003546528 124 --QQVSIRTATAKSVYQw-IVKPQTISK-TNEMFLPGRMTFIYNMEGG--YHHDIPTTLHRSKADCP-VPEeMVTVNVDG 196
O48713       124 --QRVTFRTIAAKSVYQw-IVKPQTIIK-SNEMFLPGRMTFVYDMEGG--YTHDIPTTLYRSKADCP-VPEeFVTVNVDG 196 thale cress
XP_003577889 131 --RAISFRTAIAKSVYQs-IVKSQSTPK-ANEMFLPGRMAFIYNMEDG-LITNDIPTTLHRSKADCP-VPEeMVTVSVDG 204
EGT35793     217 -------DNRMVRSLHR--VLFKNEIPL-RNDMFAKGRMAYVVELEEE---DTDIPTTLLRSLHDLP-RAEsAQSIQANS 282
Q9N4U5       208 -------ENRMVRSLHR--VLFKNEVPL-HNQLFAKGRMAYVVELEDE---ETDIPTTLLRSLHDLP-RAEsAQSIQANN 273 Caenorhabditis ...
XP_002117518 239 --EEISFRTRLAKNIHN--IVFKSSLPL-RNEFFASGRMAYAVDLNDD-EGESDIPTTIIRSKADFQ-NAEtQSDISTND 311
XP_015789168 207 --EDFMPKSTMATNILA--LLKEEKLSNeRNELFLPGRMAYTIDLEDP-FID-DIPTTIIRSKADCP-NTDsLSELSINN 279 two-spotted spi...
XP_002952015 275 AVLDRIARILSYVRTTADGKRLKR 298
XP_009028213 284 IVINKLTQILTYLRQGRARDKKKK 307
XP_011623112 197 SVLDRIAKIMSYLRLGSSGKVLKK 220
XP_003546528 197 SVLDRIAKIMSYLRLGSSGKILKK 220
O48713       197 SVLDRIAKIMSYLRLGSSGKVLKK 220 thale cress
XP_003577889 205 SVLDRIAKIMSYLRLGSSGKVLKK 228
EGT35793     283 LIISKLAHVLSHLRAEPKkkkkde 306
Q9N4U5       274 LIILKLSHVLSHLRAEPKkkkkee 297 Caenorhabditis elegans
XP_002117518 312 IVINKLTQILAHLRQGLRSKKLKK 335
XP_015789168 280 IVINKLIQITNYLRQGGA-PRKKR 302 two-spotted spider mite
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