4EJY,3I0W


Conserved Protein Domain Family
OGG_N

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pfam07934: OGG_N 
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8-oxoguanine DNA glycosylase, N-terminal domain
The presence of 8-oxoguanine residues in DNA can give rise to G-C to T-A transversion mutations. This enzyme is found in archaeal, bacterial and eukaryotic species, and is specifically responsible for the process which leads to the removal of 8-oxoguanine residues. It has DNA glycosylase activity (EC:3.2.2.23) and DNA lyase activity (EC:4.2.99.18). The region featured in this family is the N-terminal domain, which is organized into a single copy of a TBP-like fold. The domain contributes residues to the 8-oxoguanine binding pocket.
Statistics
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PSSM-Id: 429744
Aligned: 54 rows
Threshold Bit Score: 69.1894
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4EJY_A         26 VIVRGIAD--FNLKETF--ESGQCFR--WNEEEDGs--YTGVAYD-----RVVNVKl-EG--DTLIIDNTNl-------- 81  Caldanaerobact...
jgi:Cphy_2022   1 MYQITVEN--FDIRKIC--YSGQCFR--MKEISETs--YEVVAYG-----HYLRISq-QD--NELTFSCTE--------- 55 
3I0W_A         13 VIVRNVEN--FELKDIF--DCGQCFR--WHRQENGn--YIGIAFE-----KVVEVQk-IG--EDVVIYNINe-------- 68  Clostridium ac...
Q891G0         22 IILKGIEN--FELNHIF--DCGQCFR--WNRQENGn--YIGVAYG-----KVIEVEk-KQ--DEIILYNTNe-------- 77  Clostridium te...
Q2NI85         11 IVDFNEYVgdFDLILTM--NSGQTSQppWKMDDNN---YYEII-LidnidVLVKISq-EKlnDPLIVKYFSkee----fn 79  Methanosphaera...
Q81A49         10 SIAVPKE---FCFQENLryLSRSNNEcmFHIEDNK---IYKVI-PvqdvnPLVEISvnTD--GNIQIRCLEepytseksi 80  Bacillus cereu...
Q5WD74         11 IIALPEE---FDMNANLgyLKREKNEcmYETENDH---ITRMI-AigeirSLIQISviDN--KQMVVQFLNdsrpseewq 81  Bacillus claus...
P37878         11 VITLPEI---FDMNANLgyLTREKNEcmYEIENNI---ITKVI-AigeirSLVQVSviNN--KQMIVQFLNdsrpveqwk 81  Bacillus subti...
Q8KDP9         14 SLLNTKSR--LNFKDTV--QSGQSFR--WNLNETLksyYSSVIYN-----SIIFICe-IN--SEMIEVLCTdqe----ls 75  Chlorobaculum ...
WP_012508069    5 TIIKTRAP--FDIRQTL--FSGQSFL--WNINKDEpdfYAAIIKS-----KPLIIKq-IA--DNELEVYAEdkv----in 66  Pelodictyon ph...
4EJY_A         82 -TDFYDIWFDYFDLGRDYGQIK-ESLSK-DPVLKEAIKFGQGIRI-LRQDTWETL 132 Caldanaerobacter subterraneus subsp. te...
jgi:Cphy_2022  56 -GEFHSIWNEYLGLNVDYDTIT-GLVNEdDRYMKSAMSFGWGIRI-LKQELWETI 107
3I0W_A         69 -EEFKNVWSEYFDLYRDYGEIK-KELSR-DPLLKKSVDFGEGIRI-LRQDPFEIL 119 Clostridium acetobutylicum
Q891G0         78 -KEFEEIWKNYFDLNREYSKIK-TILSE-DKLLKEAIDYGYGIRI-LQQEPFEII 128 Clostridium tetani
Q2NI85         80 vEKLRTKLFYIFDLDYNINEVY--DFLEeNSQLSDVYEFNRGLRLfKSQFPFECI 132 Methanosphaera stadtmanae DSM 3091
Q81A49         81 rEAVVNYVKEWFDLTTDLAPFY--TLAKhDLLLQGPIEQYYGLRTlGIPDLFEAL 133 Bacillus cereus ATCC 14579
Q5WD74         82 rEKIVKYIHEWFDLNTDLTPFY--EMAKaDPLLKKTVETFYGLRVvGIPDLFEAL 134 Bacillus clausii KSM-K16
P37878         82 rEEIVKYIHEWFDLDNDLTPFY--EMAKaDPLLKMPARKFYGLRViGIPDLFEAL 134 Bacillus subtilis subsp. subtilis str. 168
Q8KDP9         76 gKPINEFLKHLFSLDFQEETVFsSRFQQeFPEVWNLVQSYRSVRV-MRQDPFEIM 129 Chlorobaculum tepidum
WP_012508069   67 gVPLVDFISHYFTFDIDTEQIFpDNFSHlYPTLWQLLTDYFPVRI-MRQDPFETM 120 Pelodictyon phaeoclathratiforme
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