1FFR


Conserved Protein Domain Family
ChitinaseA_N

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pfam08329: ChitinaseA_N 
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Chitinase A, N-terminal domain
This domain is found in a number of bacterial chitinases and similar viral proteins. It is organised into a fibronectin III module domain-like fold, comprising only beta strands. Its function is not known, but it may be involved in interaction with the enzyme substrate, chitin. It is separated by a hinge region from the catalytic domain (pfam00704); this hinge region is probably mobile, allowing the N-terminal domain to have different relative positions in solution.
Statistics
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PSSM-Id: 311988
View PSSM: pfam08329
Aligned: 9 rows
Threshold Bit Score: 199.595
Threshold Setting Gi: 75353764
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FFR_A         1 AAPGKPTIA-WGNTKFAI--VEVDQAAT-AYNNLVKV-KNAADVSVSWNLWNGDTGTTAKVLLNGKEAW----SGPST-G 70
gi 75353764   24 AAPGQAIIS-WMETDFSI--IEIDQAAT-SYKSLVTV-KDFAEVPVTWDRWSGESAEKWRVLLNGVVVHeesvSPAAS-Q 97
gi 81544281   21 AAPSAPSVDvYGSNNLQFskIELAMETTaGYNQMVKY-HEEAPITLKFNQWSGVTGNTYKIYFDGVEVA----TGPISgS 95
gi 82016517   19 SKPGTPQIR-WATHKYSL--VEVNEQAQ-SYNSLVKTvHESVPVSLEWDVWSGARGDSVHLVWDGQVVK----EGSSDeL 90
gi 82030445   17 AIPGTPVID-WADRNYAL--VEINYEAT-AYENLIKP-KKHVDVQVSWNVWNGDIGDIAYVLFDEQQVW----KGDAE-- 85
gi 123060857  28 AAPGKPSLA-WGETQFAI--IDVNQSAT-AYNQLVTV-KDAAAVSVSWSLWSGNVGERAQVLLNGNQVW----EGASS-A 97
gi 500839314  24 AVPGKPTLA-WGNTKFAI--VEVDQAAT-AYNNLVKV-KNAADVSVSWNLWNGDTGTTAKVLLNGKEVW----SGASTgA 94
gi 501082508  23 AAPGTPSIT-SGNDKFAI--VEVDQAAQ-DYNNLVKVhNDGVDVKVEWNVWSGDAPTSAKVLLDGKTVW----SGAGS-A 93
gi 81726546   21 AAPTAPSVDmYGSNNLQFskIELAMETTsGYYDMVKY-HDQAKITVKFNQWSGTPGDTYNIYFDGVKVA----TGAITgG 95
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
1FFR_A        71 sSGTA-NFKVNKGGRYQMQVALCNADG----CTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQNS 133
gi 75353764   98 -KAST-TLQVRQGGQYEMTVQLCNGSGateeCSTSAAKSIVVADTDGSHLDPLPMNVDPANGNYTTPA 163
gi 81544281   96 -QTTA-QFTYPKGGVYQLVIEACDATG----CTKSAPSEITIADTDGSHLKPLKMNVDPNNKSYTipq 157
gi 82016517   91 -REQKiVYNVRKGGRSSVAVRLCDGEG----CSDSVPVEVVVADTDGSHLGRLEYEWRENNVPYQRAP 153
gi 82030445   86 -SKRA-TIKVLVSGQFNMRVKLCNEDG----CSVSNPVLVKIADTDGGHLTPLEYTWLENNKPGRRed 147
gi 123060857  98 -SGTA-NFNVNEGGRYQMQVQLCNSEG----CTASDPKTIIVADTDGSHLLPLNAPLLENNRPYTNHS 159
gi 500839314  95 -SGTA-NFKVNKGGRYQMQVALCNADG----CTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQDS 156
gi 501082508  94 -AGSA-TFKVKKGGRYQEQVELCNTSG----CTKSASKLIIVADTDGSHLLPLNTTMKENNKTFAQHT 155
gi 81726546   96 -QTTA-TFDYGQGGLYQMEIEACDATG----CSKSDPAEITIADTDGSHLKPLTMNVDPNNKTYNTDP 157
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