3JCJ


Conserved Protein Domain Family
IF2_assoc
?
pfam08364: IF2_assoc 
Click on image for an interactive view with Cn3D
Bacterial translation initiation factor IF-2 associated region
Most of the sequences in this alignment come from bacterial translation initiation factors (IF-2, also pfam04760), but the domain is also found in the eukaryotic translation initiation factor 4 gamma in yeast and in a hypothetical Euglenozoa protein of unknown function.
Links
?
Statistics
?
PSSM-Id: 429947
Aligned: 79 rows
Threshold Bit Score: 42.5237
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
3JCJ_f                    56 PDKLTLQ----RK-TRSTLNIPGTGGKsKSVQIEVRKKRTFVKR 94  
Q0AK69                    12 RRPLSLK----RS-GGGTVQQSFARGRsKAVVVEKKRKRVATPa 50   Maricaulis maris MCS10
B4RC55                    16 RQPLTLKpraaGSvSSGTVKQSFSHGRtKTVVVETKRARTHAPA 59   Phenylobacterium zucineum HLK1
PRJNA212980:JCM7686_2997  11 KKPLGLGg---GAgRSGSVKQSFSHGRtHNVVVETKRKRVVVPg 51  
A8LQ56                     7 KKTLGLR----GGsRTGQVKQSFSHGRtKNVVVETKRKRVLVPK 46   Dinoroseobacter shibae DFL 12 = DSM 16493
Q28WF7                     7 KKPLGLS----GGaRSGRVNQSFSRGRtKSVVVETKRKRVMVPK 46   Jannaschia sp. CCS1
BAI96454                  13 RKPLGIK----RTvESGQVQQQFSHGRkNTVVVEVKRRRILGKP 52  
Q2G5E7                    12 RRPLGLK----TAvEAGEVKQTFSHGRtNKVVVEVKRRKLMGRp 51   Novosphingobium aromaticivorans DSM 12444
Q2NC10                    11 RKPLGLK----RSvDAGEVKQTFSHGRtNKVAVEVKRKRKLLKP 50   Erythrobacter litoralis HTCC2594
WP_025295078              12 RAPLGLK----RTvETGKVKQSFSHGRsNTVVVEVKRRRVLGKP 51   Sphingomonas sanxanigenens
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap