Conserved Protein Domain Family
RAP

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pfam08373: RAP 
RAP domain
This domain is found in various eukaryotic species, where it is found in proteins that are important in various parasite-host cell interactions. It is thought to be an RNA-binding domain. The domain is involved in plant defence in response to bacterial infection.
Statistics
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PSSM-Id: 429953
Aligned: 63 rows
Threshold Bit Score: 44.1082
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A0BQD8        489 IEVNGPHHYcsivgdtlpndavqHLSTnQAMYetlKTSLKTRLLQQKGYRVINIPYFKWNGWciSNKQDKI--LNDM 563  Paramecium tetra...
Q95KD0        699 IQFTNRNQY--------------CYGS-RDLLg--LHSMKRRQLARLGYRVVELSYWEWFPLlkRTRLEKLafLHEK 758  crab-eating macaque
Q5M9G9        561 FLRWEFPNF--------------NSRS-KDLLg--RFVLARRHVLAAGFLVVDVPYYEWLDL--KSEWQKTayLKDK 618  Norway rat
CAG11948      432 fvaweFPNF--------------SSKS-RDLLg--RFAMMKRHLQLAGFITIEVPYYEWLEL--KTDRQKVafLKDK 489 
Q5M7V7        609 VLCVPKSAY--------------CLNS-NHLRg--LMAMKIRHLNVMGFHVILIHNWELKKL---KMEDAVtfVRKK 665  Norway rat
Q9NYY8        636 VLCVSRSAY--------------CLGS-SHPRg--FLAMKMRHLNAMGFHVILVNNWEMDKL---EMEDAVtfLKTK 692  human
XP_015314319  446 vlCVPKSAY--------------CLDS-THPKg--YLAMKMRHLKIMGFHVILVNNWEVEKL---EMKDAVafLKTk 502 
Q6DI86        763 IELLDVRAF--------------CSNI-PHLKg--KSAMKKRHLEILGYRVIQIPYFEWNSMamSTKDARMdyLREH 822  house mouse
Q28DE0        767 IEFLDSKAF--------------SKNS-SNIKg--EYVMKKRHLEILGYHVVQIASFEWNSMelSTKDAWIdyLRKR 826  tropical clawed ...
CAG09932      662 IDFLDSKCF--------------CKNS-HHIKg--ETLMRKRHLEILGYRLVQIPHFEWNSMelSTQDAWKeyLKRK 721 
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