Conserved Protein Domain Family
NIT

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pfam08376: NIT 
Nitrate and nitrite sensing
The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.
Statistics
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PSSM-Id: 462453
Aligned: 316 rows
Threshold Bit Score: 47.8723
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012233436          62 LHALQKERAWTALVEGLearppettdvEgerhATpplnraaellrAGGqLRDARAATDESLAQldafLA----------- 130  Sorang...
WP_013677750          71 ATAMRAERDVTVRFVAA----------Nr--tGD-----------RAA-VDAAAATTDAQLAK----AVqalrstadddt 122  Pseudo...
WP_015804122         104 gDALQLERDAAVGYVAAgrktnpdataRvg------------------eLNTRSGKVDAEVMRlrdvgaatg-------- 157  Actino...
jgi:Svir_24610        78 LEALQRERTLTAEALTAga-------gV----DS------------PE-LHEIRTAVDDAWAP----LLdtvaqa----- 124 
EHR50471              86 lDGLQRERTLTAELLAEgr-------gS----GS------------PQ-LQGIRAEVDMAVSP----VTsaaaeve---- 133 
AORICAS:Z0002454      49 ADGLGRERTQSAAGLTAgt-------vG----GT------------LE-LGSARADVDTAIPL----YGaaasrav---- 96  
DU:RAM_12665          63 TAALQQERTVTSAMLTAgt-------vG----GT------------PE-LAAARKATDAATGP----FTaeqdraa---- 110 
WP_015103606          73 IANIQAERAVAARG-VEat-------sV----EQ------------RR-FKELLRNTDAAVAG----VRnllerta---- 119  Saccha...
jgi:Amir_5172         73 VASVQDERALSAQRAEGag-------------------------vDKRnFDAVTNETDRAANA----VRdlvrntp---- 119 
AMEG_HIPS:KALB_3205   71 TTQLQQERTLAVQQp----------------tRP-----------TPAyQR-QGETVDRLGAE----LLdqakrtp---- 114 
WP_012233436         131 -------ARDlsglprrlardLadgRakvgELGA---FRGQAdA------KTVSLDSVlRVFGGINVSLIRANAGLSELS 194  Sorang...
WP_013677750         123 gvspqslDGT-----------E---G----ALQD---LRRDT-Tg----tALPTEGVL-NRYGDVIQQVDVVDRTILRQV 175  Pseudo...
WP_015804122         158 ------------diddtvrtaY---EkslqSLDGlnsLRNTVlEsqypdaSVA------SAYGQLLGTLLQVHRATSSSL 216  Actino...
jgi:Svir_24610       125 --geslaSLRtkl-----teqF---G----ALDE---TREQI-La----gQLDTVEAV-EAYTNVVDTLVELDTAVAAGI 181 
EHR50471             134 qaggaiaGPRkav-----deqL---G----RLAD---LRKRV-Aa----gQVGPIEAV-NEYSGITTALLDLDSALVAGI 192 
AORICAS:Z0002454      97 enepslrQAReaa-----aaqL---D----RLPD---IRQRA-Ss----gQLDPVQAI-GEYTEVTTALLALDTALAAGA 155 
DU:RAM_12665         111 qaepgvsGAGgta-----saqL---G----NLAF---LRRQV-Dg----gQLDPGQAI-TAYSALTGSLISLDTAATAGA 169 
WP_015103606         120 sslgpvaTARfddv----nvqL---D----GLPQ---LRDRV-La----rTIEPAGAI-GGYTVVLRALLDFDQAMVGDF 179  Saccha...
jgi:Amir_5172        120 -tlgpvaEARyrda----lvqL---D----GLPQ---LRDRV-Ss----gGVDLAGGI-GAYSVVIRSLTDFDQAMVGDF 178 
AMEG_HIPS:KALB_3205  115 -glsaasQAAvqdl----tklL---G----LLPS---YRRPV-Le----gRDDGTDAV-NSYTEVITSALNLNQSLLLQL 173 
WP_012233436         195 DEGELLRSIQSIVAVHEFAERASRQHALLAHAFAsTqf-----ePGAFKTLVTLMTE----EQly-heEF-----IANAS 259  Sorang...
WP_013677750         176 ATPDVAGLTDALTATNTAAEQLAVQHTVVAAAIA-AgkvtesdlTTVNATESAYNSA----YN-----SY-----RLALT 240  Pseudo...
WP_015804122         217 SNEHLTPLVGANLALYAAKEQLAQQN---SILIS----------AANRSEFGPNQANalrgAQskldsAItdftnVAS-- 281  Actino...
jgi:Svir_24610       182 GAEDLGATANAAHNLLVAREEVSLHQALIAHGIE-Fel-----tPSEFDAVRTAEVR----RVdr-ltEF-----SVIAT 245 
EHR50471             193 GDDGTGSTGNALHDLLVAREELSIQQALVSYGIS-Rsg----laPSEVNQLRTSDVR----LSdr-idEF-----RVSAT 257 
AORICAS:Z0002454     156 GQDDLGGTPTALHDLAMMKEQLSLSQALVSFGIA-Rss----laPSELDQLRTAELR----LTdr-ltDF-----RAAAS 220 
DU:RAM_12665         170 GDGTLGGLPAGLHELLVAGEQVSLSQALVSYGIG-Rag----ltPSELATLRAAELR----LAdr-lvDF-----RSAAG 234 
WP_015103606         180 GDPALAGTANALHNLAMAAEQISWQHATVLSGV--Rtgv---lpETERNSLEQSWTR----QQdk-iaDF-----TAVAT 244  Saccha...
jgi:Amir_5172        179 GDASLTGTANALHNLAMTGEQVSWQQATVLAGVSrRgl-----lDTEKTMLEQSWTR----FQdk-vaEF-----TAVAT 243 
AMEG_HIPS:KALB_3205  174 GDQELAGPATALLDLGGALEQLRLQQALVLVGIG-Rghl---ldSEL-RMLAAAETR----FQdr-iaNF-----HAVAA 238 
WP_012233436         260 --EPAraLYNAAR---SNpRVRRADELRAAa--------------iGSTDealaidhdaWFEAQQ---GR-------VDG 310  Sorang...
WP_013677750         241 peQLQ--QFGTFGt--DP-ANTARNQLQAGilqtap----gralptDPAA---------WDAAYT---SV-------DDV 292  Pseudo...
WP_015804122         282 --QDNrqNYQDTVsgtAVdARNRLVTLALV---------------------------------QNdngKAisfnendALR 326  Actino...
jgi:Svir_24610       246 erQRE--LFDDTVr--GQ-TFDEYQRIVGAllssqdag-selfsstTAEH---------WAETGD---VV-------FSA 300 
EHR50471             258 egQRQ--DFDNTVr--GE-AFDQFGRVVAGvlaqqdvg-gdpfesvSPQQ---------WSADAS---AV-------FAA 312 
AORICAS:Z0002454     221 eqQRR--EFSAAVt--DQ-AMENRDRLAKTalgeqgtpsaqafrtlSAQG---------WTDAST---AV-------IGK 276 
DU:RAM_12665         235 dtLQR--DFAAIAe--GT-QAQSRARMVETvlnaqssavddafralPAAD---------WNAASG---AM-------RAQ 290 
WP_015103606         245 pqQQA--DFRSAVa--GE-TVASRDALLQQvrvdpe-----glrriDAEV---------WDDGST---VT-------AKQ 295  Saccha...
jgi:Amir_5172        244 adQQA--DFRSTVa--GP-EVDTRNRLLQGvr-------------tDPGTvrtqvpvkdWNTASS---ST-------LSR 295 
AMEG_HIPS:KALB_3205  239 pqWQQ--QYQQVVa--GV-DVGTRKQLLQFalsapaea-patgtgkPKPVptlniaadeWNRTSE---AT-------ATL 302 
WP_012233436         311 L----AAIEEEAISGMR 323  Sorangium cellulosum
WP_013677750         293 L----QKSTQAVGTQLK 305  Pseudonocardia dioxanivorans
WP_015804122         327 VgedtAALLRQVSLDIE 343  Actinosynnema mirum
jgi:Svir_24610       301 M----SEVGERLGTELA 313 
EHR50471             313 M----GRVADRMGSQVT 325 
AORICAS:Z0002454     277 V----GEVANKFGAEts 289 
DU:RAM_12665         291 I----GAVADRLGASAS 303 
WP_015103606         296 Y----DRVLRGLEDQLK 308  Saccharothrix espanaensis
jgi:Amir_5172        296 I----EVVMSRLGGELL 308 
AMEG_HIPS:KALB_3205  303 M----TRVRIGLGDEIA 315 
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