Conserved Protein Domain Family
Tma16

?
pfam11176: Tma16 
Translation machinery-associated protein 16
Proteins in this family localize to the nucleus. Their function is not clear.
Statistics
?
PSSM-Id: 463236
Aligned: 130 rows
Threshold Bit Score: 96.0452
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WGS:AAWC:PGTG_18412.3 107 VLSKLHPHSRRAKQITRIALRDDKLALNKKEKKKLGNAL-TSRLIWFIEAnkqeartKDPsgqpalpipSADLSTLHVLI 185
XP_001626535           54 IKKAIHPNSRKASQLARSAHRDEKLQRKKDERTHMLEVKvGDKCRWFYEH-------IDDtk------tRYTAQEVRDLI 120
5_pfamImport            1 STKLLHPNSRTALNIVQQSRRHNLKLNKAKERASRLDSI-VEKLLWFQSN-------LESd-------kCYSKFEYTELV 65 
XP_001951416            8 VLNANHPNSRKTKQLIKSKHKLAFRDKKKYINLAKPSSL-CEKLIWFRDN-------IDNti------eQYTQDTLSLLI 73 
Q7PQH2                  7 LAKCKHPKSRKTLALTRKVKKINNREKTKLGHAAKANIV-GKKLAWFAER-------LLErq------dPLMPAEYEALV 72  Anophe...
ETN62857               10 LAKCKHPQSRKTLALARKIKKINNREKIKLGHAAKANVL-GMKLAWFAEK-------VEGre------ePVSPAEYEELI 75 
1_pfamImport            1 FEKCKHPNSRRIKSVSKKAKRMNNKHKKQLGHAIKSNMM-GEKLSWFLGQ-------IEEdr-----aePLTPQEFIDLI 67 
WGS:AANI:GJ15701-PA     8 LEKCKHPNSRKTKALGKKARRQNNKHKLRLGHAIKSNLL-GEKLSWFLGH-------IDEgr-----ttPLSPQEFENLI 74 
EDW51075                8 LEKCKHPNSRKTKALGKKARRQNNKHKVRLGHAIKSNIT-GEKLSWFLGQ-------IDEgr-----tePLTPQELEDLI 74 
XP_004929000            8 LEKLKHPNSRKTMTLAKKLKKSEKKDQSKLGTHIKQNLI-GEKIMWFKER-------IPEec------eVFDKEQTLKLI 73 
WGS:AAWC:PGTG_18412.3 186 TsFIARNSSLINEETSKR----TkhfSN--RPK-STALEKLESLRRSELIEYS-TnGFLIPDLRTAENLKLLDQWkdehR 257
XP_001626535          121 EmYLHRFDDELQKIEELNnv-----vKGrqRMH-VNKEDAMRTIIKVERELFS-TgGLEIPDLTSAKNFELFKIW----N 189
5_pfamImport           66 ErYFTRFNDELEQIEIIRsvgcR---KP--IQH-GARERSIKLAQEHELMLFN-StGLELPDVFNKKNFREFMEW----D 134
XP_001951416           74 EkYLNRFDHEASIIKARH----Kd--KG--NRRfASREDVIRHTIEREREEYN-TaGIEVPNILEASQLLYLRTW----D 140
Q7PQH2                 73 DeYLQRFDQELEQIKIVQsigkH---RA--TQH-AAREAVIKTTIETEKLNFNtGgGIELPDLCDAVNFKLFQEW----D 142 Anophe...
ETN62857               76 DlYLRRFDGELEQIKIVQaigkH---RA--NQH-AAREAVIKTTLEMEKQHFG-GgGLELPDLCDAEHFKKFQEW----N 144
1_pfamImport           68 DeYLHRFDDELEQIKIKQsiskN---RS--TQH-FARESAIKMTLDREVGEFN-GgGMEFLNLCDPIKFKSLMDW----D 136
WGS:AANI:GJ15701-PA    75 AlYLQRFDEELAQIALKQsigkH---RA--HQH-AARRDVINITLERERNEYQ-SgGMEMLNLCDAAKFKALLDW----D 143
EDW51075               75 ElYFTRFDEELEQINLKQsigkH---RA--NQH-AARKDVITMTLEKECNEFR-TgGLELMNLCDPLKLKMLRDW----D 143
XP_004929000           74 EsYLSRFDEELEQIALKNsigqR---KN--RQH-ASREDVINMTRKKEQDEFE-TcGIEIPDLMDPQQMNVLRNW----N 142
WGS:AAWC:PGTG_18412.3 258 CDRSFLARVKLIRLFK 273
XP_001626535          190 CDMKNFAPIKMKLFSN 205
5_pfamImport          135 GTPQTLPRLKLMRFVK 150
XP_001951416          141 GDIKYLPNFKIIRFRC 156
Q7PQH2                143 GSAASIQHLKLKFISR 158 Anopheles gambiae str. PEST
ETN62857              145 GDAASVQHLRLKFISR 160
1_pfamImport          137 GNAINIQHLKFELISR 152
WGS:AANI:GJ15701-PA   144 GSALSVQHLKLDFVSH 159
EDW51075              144 GSALSVQHLKLDLVSH 159
XP_004929000          143 GELRFLQHFKLKRFTK 158
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap