7DTD,7DTC


Conserved Protein Domain Family
Na_trans_cytopl

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pfam11933: Na_trans_cytopl 
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Cytoplasmic domain of voltage-gated Na+ ion channel
This is a large cytoplasmic domain towards the start of voltage-dependent sodium ion channel proteins in eukaryotes. It is found closely associated with pfam06512 and pfam00520.
Statistics
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PSSM-Id: 463401
Aligned: 30 rows
Threshold Bit Score: 103.66
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7DTD_A        598 SLLSIRGSLFSP---RRNSRTS-LFSFR---GRAK------------------DVGSENDFADDEHSTFEDNEsRRDSLF 652 
XP_002427248  472 TSLSLPGSPFNV---RRSSRGShQFTVRngtGRGRfvgpptgdrkplvlstylDAQEHLPYADDSNAVTPMSE-ENGAMV 547 
EGI61230      567 ASLSLPGSPFNL---RRSSRGShQFTIRn--GRGRcfppggdrk-plvlstylDAQEHLPYADDSNAVTPMSE-ENGTIV 639 
EFN86793      533 ASLSLPGSPFNI---RRSSRGShQFTIRn--GRGRfvppggdrk-plvlstylDAQEHLPYADDSNAVTPMSE-ENGTIV 605 
XP_019650094  507 NHLSSIHGLSRTsmkPRSSRGS-IFTFR---RR--------------------DLGSETDFADDENSTAGDSEsHHTSLL 562 
NP_001153633  507 NHLSLTRGLSRTsmkPRSSRGS-IFTFR---RR--------------------DLGSEADFADDENSTAGESEsHHTSLL 562 
XP_019471781  501 SLLGLLYGPNTNqvkRRLSHGS-VFNFQip---------------------alEVDSKADSADEEPHSTGEKKiQGRSMS 558 
EFN61422      538 ASLSLPGSPFNL---RRSSRGShQFTIRn--GRGRcfvppggdrkplvlstylDAQEHLPYADDSNAVTPMSE-ENGTIV 611 
7DTC_A        550 NHLSLTRGLSRTsmkPRSSRGS-IFTFR---RR--------------------DLGSEADFADDENSTAGESEsHHTSLL 605 
KAE9430538    558 ASLSLPGSPFNL---RRGSRGShQFTIRn--GRSRfpggdrkp---lvlstylDAQEHLPYADDSNAVTPMSE-ENGAMV 628  Apolygus lucorum
7DTD_A        653 VPR---RHg-ERRNSNLSQTSRSS-RMLavfpangkmhstvDcngvvslvggp------svptspvgqlLPEVIidkpa- 720 
XP_002427248  548 VPMf-yANlgSRHSSYTSHASRMSyTSHg------------D---------------------------Llgsfg----- 582 
EGI61230      640 VPVy-yANlgSRHSSYTSHASRLSyTSHg------------D---------------------------LAFSGirgid- 678 
EFN86793      606 VPVyyaANlgSRHSSYTSHASRLSyTSHa------------D---------------------------LAFGNirgid- 645 
XP_019650094  563 VPWp------LRRPSAQGQLSPGT--SApghalngkrnstvDcngvvsllgtg-----daeatspgshlLRPVIldrp-- 627 
NP_001153633  563 VPWp------LRRTSAQGQPSPGT--SApghalhgkknstvDcngvvsllgag-----dpeatspgshlLRPVMlehp-- 627 
XP_019471781  559 VPQv------GRRSSMPSQKSYGShPATpscmqsskranadDcnglisvmgggngkvhgldtapsegimLPPVMedlgkg 632 
EFN61422      612 VPVy-yANlgSRHSSYTSHASRLSyTSHg------------D---------------------------LAFPGirgid- 650 
7DTC_A        606 VPWp------LRRTSAQGQPSPG--TSApghalhgkknstvDcngvvsllgag-----dpeatspgshlLRPVMlehp-- 670 
KAE9430538    629 VPLy-tTGlgSRHSSYTSHASRISyTSHa------------D---------------------------Llsgig----- 663  Apolygus lucorum
7DTD_A        721 tddngTTTETE-MRKrRSSS----------------------------------FHVSMDFLEdPSQRQRAMSIAS 761 
XP_002427248  583 gngkgRTKESQ-LRD-RNRAlrcsqrglpiteqptskfreieenedgnckekyrRQSDNPFIE-PMHNQPTVDMND 655 
EGI61230      679 sigkqITKQEQiLRN-RNNKqtpanghvtdanqkn----yhfeasdmedpmgknKPQDNPFIElPAQQHTVVDMKD 749 
EFN86793      646 sigkpITKQEQiLRN-RNNKqttpanghltdsnqk----fyhhetdledpmgktKQQDNPFIE-PSQQHTVVDMRD 715 
XP_019650094  628 -pdttTPSEEP-GRPqMLNP----------------------------------QAPCMDGFEePGERQRALSAVS 667 
NP_001153633  628 -pdttTPSEEP-GGPqMLTS----------------------------------QAPCVDGFEePGARQRALSAVS 667 
XP_019471781  633 dlqpaVNDESSmMHLh--------------------------------------PQLSVEYFNeTFQRQRAASAVS 670 
EFN61422      651 sigkqLTKQEQiLRN-RTNKqttpanghvtdtnqk----syhfetdledpmgktKQQDNPFIE-PSQQHTVVDMKD 720 
7DTC_A        671 -pdttTPSEEP-GGPqMLTS----------------------------------QAPCVDGFEePGARQRALSAVS 710 
KAE9430538    664 -gpraPTKESK-LRSr-SSRnssvtvthqplqdkaf--lrdfdtsdledglpkvKHQDNPFIE-PAQQQAVVDMKD 733  Apolygus lucorum
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