5TO3


Conserved Protein Domain Family
cEGF

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pfam12662: cEGF 
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Complement Clr-like EGF-like
cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.
Statistics
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PSSM-Id: 463661
Aligned: 524 rows
Threshold Bit Score: 26.6028
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5TO3_B               350 SCECP-EGYIl-dDGFICTDIDE 370 
Q559U0               311 NCNCP-AGYIkstDGLSCIDVDE 332  Dictyostelium discoideum AX4
XP_002113519         541 RCVCP-QGYTg--DGHVCIDVNE 560 
O42182               481 HCTCPaSGYTlaaNGRSCQDIDE 503  zebrafish
WGS:AAPU:GI13136-PB  960 QCACP-AGYQlaaNARDCQDVDE 981 
PNI73456              24 QCACPeQGYTmtaNGRSCKDVDE 46  
XP_001625572          11 ACACP-AGYTn--NGHVCDDVNE 30  
BAD18457             295 LCTCP-AGYTlreDGAMCRDVDe 316 
Q8N2S1               653 LCVCP-AGYQaapHGASCQDVDE 674  human
CAG06344             458 HCSCPiNGYTlatNGRSCQDVDE 480  spotted green pufferfish
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