Conserved Protein Domain Family
GVQW
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pfam13900: GVQW (this model, PSSM-Id:290611 is obsolete)
Putative domain of unknown function
This short domain is often found nested inside other longer domains. The function is not known, but the domain carries a highly conserved GVQW motif. It is possile that this is an AluS that has expanded in Human and Macaque genomes.
Links
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Statistics
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PSSM-Id: 290611
Aligned: 32 rows
Threshold Bit Score: 70.1282
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Download Cn3D
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
EAW48919       6 VAQAGVQWCDLGSLQPPPPRFKQFSCLSLPSSWDYRHVPPCLANFCIF 53  human
EHH62365      41 AAQARIQWLNLSSLQPLHPRLKQFACLSLPSSCDYRHVPPHLVNFCIF 88  crab-eating macaque
EAW56724      91 CCQAGIQWCYIGSLQPLPPGFKQFPCLSLLSSWDYRCTPPHLANFLYF 138 human
EAX05863     109 klsaGVQWHHLGSLQPLPPGFKEFSCFSLPSSWDYRHAPPHPVrdlys 156 human
EHH52261       3 VTQACVPWYNLSSLQPLPPRFKRFSCPSLPSSWDYRRRPPHSANFFVF 50  crab-eating macaque
EHH54855      16 VAQSGVPWSHL-RLQPLPPGFKRFSCLSLLSSWDYRHMPPHPATLCIF 62  crab-eating macaque
Q86U02        57 VAQTGVHWCNLGSLQPLPPGFKRFSCLSLPSSLDYRHAPPCLANFYIF 104 human
EHH18945       6 VTQAGAQWCDLDSLQPPPPEFKRFSRLSLPSGWDYRRVPPCLANFCIF 53  Rhesus monkey
NP_001158312  75 VAQAGVHWNDLSSLQPLPPWFKQFSCLSLPSSWDYRRTPPRLANFCIL 122 human
EHH60591       6 VTQHGVQWHDLSSAQPLPPGFKQFSHLSLPSSWDYRCAPPHLANFCIF 53  crab-eating macaque
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