Conserved Protein Domain Family
PAF

?
pfam15715: PAF 
PCNA-associated factor histone like domain
This domain corresponds to a histone like fold in p15(PAF).
Statistics
?
PSSM-Id: 464819
Aligned: 13 rows
Threshold Bit Score: 74.9225
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002131342   1 MVRTKATV--------NSaaFRASAAKAPRKNVAAPSRSSAFEIGS-P---AGKKNQSV--GGNPVCQRPTPDWQKPIAS 66 
Q6AZL2         1 MVRTKADSagssassgSY--RKAVAARAPRKTFGSSSSGSNHVTSP-Tg--KKSESKYA--GGNPVCVRPTPTWQKGIGE 73  tropical clawed...
XP_011403116   1 MVRTKANN---------ActRKAVAAKAPRKSLGGGGGGVRHNFTS-PssaGRKKGKGV--GGNPIRVHPTPAWQKGIDL 68 
XP_005795868   1 MVRTKADSvp-----aSY--RKAVAASAPRKSLGSSLANASSSSSGhSs--TLAKNKYA--GGNAVCPRPTPTWQKGIGD 69 
KPP70834       1 MVRTKADSvp-----gAY--RKAVAASAPRKSLGSSSSAN-SAGSSqSg--TPAKNKYA--GGNPVCPRPTPKWQKGIGD 68 
EKC28576     165 MVRTKADGg------sSSasRKVVAARAPRKALGGSGPSSSASNSP-----SGKSAKYA--GGNSACPRPTPDWQKGINS 231
XP_001607698   1 MVRTKADAa----------vRVAAGGKAPKKTANRAPQSPAPSSDK-------GGKDNL--PGNRYCPRETPAWQKKITF 61 
EEB17226       1 MVKTHSNPk-----------NIRVTAKAPRKSTTTRPTDLSTS----------SGRKYT--SLNNYVPRPVPAWQKEITT 57 
OWR53775       1 MARTKASVg-----------AKISSGKSSKARCSAAPPPSSTSSTGt----HIYSKSISasGGNPVCPRETPKWQKPITN 65 
1_pfamImport   1 MVRTKASV--------TSaaIRASAAKAPRKNFTASSSHSSVDFSS-P----SGKKNNV--GGNPVCPRPTPDWQKPIAT 65 
XP_001375098   1 MVRTKADCvp-----gSY--RKVVAARAPRKVLGHSSFANSSPSPL-S---RKAESKYA--GGNPVCVRPTPTWQKGIGE 67 
XP_003778522   1 MVRTKADSvp-----gTY--RKVVAARAPRKVLGSSTSATNSTSVS-S---RKAENKYA--GGNPVCVRPTPKWQKGIGE 67 
XP_019332925   1 MVRTKAGCgga---ggAY--RKVVAARAPRKVLGPSSSVNSGSSPP-T---KRVESKYA--GGNPVCVRPIPTWQKGIGE 69 
XP_002131342  67 FFtt-----------kLPSAKsNgdtdlveklfepvdketpdepekmetsDDKENQNP--EVSDEAgpSTS----RPTKT 129
Q6AZL2        74 FF--------------GSPSTsQ---------------------------PEKENRIP--SDDEEA--GGS----GAGKA 104 tropical clawed...
XP_011403116  69 FMgggss-----ketaASSSSsRs-------------------------eENKENFPK-----GKGkrGVSgkerHKGEK 113
XP_005795868  70 FF--------------GGPPR-K---------------------------PEKENQKPteSDEEEA--GGS----GMSKA 101
KPP70834      69 FF--------------GGPSR-K---------------------------PEKENQLPl-SDDEEA--GGS----GISKA 99 
EKC28576     232 FF---------------QSPQ-----------------------------KGKENQSP--SDSESAggGSS----QGSSS 261
XP_001607698  62 FYnknddemnessssqANDA------------------------------DEKQN--------------------SSGEE 91 
EEB17226      58 FFhr---------------------------------------------mEESDSSGP-----------------STSEN 75 
OWR53775      66 FFinkpveesletagsSKP-------------------------------KPRRNVIN--SDDEEVnnNDEkprnKELDD 112
1_pfamImport  66 FFq-------------SKPTKsQseadlveklfep---aqdeenmevemlDNKENENP--ESPEEPvtS------RTTKI 121
XP_001375098  68 FF--------------GMSSK-P---------------------------SEKENQIP-----DEAeaGSS----GLGKP 96 
XP_003778522  68 FF--------------RLSPK-D---------------------------SEKENQIP-----EEA--GSS----GLGRA 94 
XP_019332925  70 FF--------------RQSPG-S---------------------------SRKENQVL---DDEEA--GSS----GKGRS 98 
XP_002131342 130 KRRRILTiqesdseteevlsgekpstsgekpstsgekpstsgekpstsgekpstsgeKPSTSGEQP 195
Q6AZL2       105 PRKSRPL--------------------------------------------------PPDPSEEAA 120 tropical clawed frog
XP_011403116 114 DTAAAVIdveemnndeddreqdeeteeineq--seeeredeeleelksedeeeeveeEEEIEEDDI 177
XP_005795868 102 SRKSRPL--------------------------------------------------PAEDEEEDD 117
KPP70834     100 PRKSRPL--------------------------------------------------PEDDDTEDD 115
EKC28576     262 SASSCPDsgrykkdsrgtc---------------------------rltlttawngtKADISARER 300
XP_001607698  92 MKKNKPLddsnemdvkes----------------------------drspsktkvikTEDCDDDNE 129
EEB17226      76 NLNTH----------------------------------------------------QEDQESEES 89 
OWR53775     113 SIELEPLtgenshkiveyytk----------------------dkgkgkgkkdkenvDNNKRCLEE 156
1_pfamImport 122 KRRRILMiqdsd----------------------------------------sdtedQPSTSGDQP 147
XP_001375098  97 KRKSYPL--------------------------------------------------RPDPTEDDE 112
XP_003778522  95 KRKACPL--------------------------------------------------QPDHTNDEK 110
XP_019332925  99 SKKACPL--------------------------------------------------PPDPTEDDA 114
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap