5EMO


Conserved Protein Domain Family
Qua1

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pfam16274: Qua1 
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Qua1 domain
This domain, approximately 40 residues in length, is mainly found in KH-domain containing, RNA-binding, signal transduction-associated protein 1 from yeast to human. It forms a homodimer composed of a perpendicular interaction of two helical hairpins, and the Qua1 domain is sufficient for homodimerization which is required for the regulation of alternative splicing.
Statistics
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PSSM-Id: 465079
Aligned: 13 rows
Threshold Bit Score: 72.4587
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5EMO_A         6 KYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGEGK---DEEKYIDVVINKN 55 
Q6NW62         6 KYLPQLLAERDSLDPSFTHAMKLISAEIEKIEKGDTEk--DTESYLDLFTMKN 56  zebrafish
XP_007249462   6 KYLPQLLAERDSLDGSFIHAMKLISAEIERVQKEEAPe-kDNEAYLDLFTAKN 57 
XP_002609602  12 KYLPQLLAEKDSLDPSFVHASRLIEEEISKLEKDDKSk--EPPKYKEVHTDKP 62 
XP_004077249   5 KCLPELVAEKNSLDPSFVHAVRLLAEEIEKYDGDELRkdgDVKKYLDIISNKN 57 
XP_001364980   5 KYLPELMAEKDSLDPSFVHATRLLAEEIEKFQGSEGKkddEEKKYLDVISNKN 57 
XP_001370780   4 KYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGESK---EEEKYIDVVINKN 53 
1_pfamImport   1 RFFPTTMARIISCRPRLGVTIELCMKEIEKFQKGEGK---DEEKYIDVVINKN 50 
2_pfamImport   1 RALEALKQRLDGLFPEMSHVIQILSLEIDKIQKGESKk-dEEETYLDLFSHKN 52 
Q60749       102 KYLPELMAEKDSLDPSFTHAMQLLSVEIEKIQKGESKk-dDEENYLDLFSHKN 153 house mouse
XP_011283056 102 KYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKk-dDEENYLDLFSHKN 153
3_pfamImport   1 KYLPELMAEKDSLDPSFTHAMQLLTAVLEGIGFFWEQe-pGSDGILEIFSPKN 52 
XP_011614545   5 KYLPELLAEKDSLDSSFTHAMKLISAEIERIQKGETKkepEKETYLDLFATKN 57 
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