Conserved Protein Domain Family
RSB_motif

?
pfam16294: RSB_motif 
RNSP1-SAP18 binding (RSB) motif
The RSB motif on the Acinus protein is the core around which the ASAP complex is built. The apoptosis and splicing-associated protein complex, ASAP, is made up of three proteins, SAP18 (Sin3-associated protein of 18 kDa), RNA-binding protein S1 (RNPS1) and apoptotic chromatin inducer in the nucleus (Acinus). The ASAP complex appears to be an assembly of proteins at the interface between transcription, splicing and NMD, acting as a hub in the network of protein-interactions that regulate gene-expression.
Statistics
?
PSSM-Id: 465085
Aligned: 22 rows
Threshold Bit Score: 63.9853
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EDW55708     588 KDRLDSrsrdaERAGQERKRSRDREGR-GRDRERpd-rNAHARSRSGSPasktKKKENEPP-IRLLDDLFRKTKGTPCIY 664 
XP_008209853 814 LGKEDG-----QLHVKEKERERKEFEKkKRQRSR----SPVIEVHLPAParkfKKKEEEPPtAKLLDDLFRKTKATPCIY 884 
EFN74327     747 LGKEDG-----QQHIREKEREKKEHDKkRRARSR----SPALDAHLSAParkfKKKEDDPPpAKLLDDLFRKTKATPCIY 817 
XP_008193653 728 IGK------------KDVRRDRSRSRErSRKHRRt--pSPSDDFITRKQ----RKAEDSVP-QKLMDDLFLKTKATPSIY 788 
XP_001949796 683 RGKLEDmngdgEKDDKRIKRKISDDPHaTKDKKLkkdeKDLQDKRKKSK----SKTPDRIP-TKSLDELFRKTKTTPTLY 757 
Q16HC7       630 RDRSGRv----DEGRGDRGRRRSSEREfGRDRDRr--rGSTSVSPARKf----KKKENEPP-IRLLDDLFRKTKTTPCIY 698  yellow fever m...
ETN60773     755 ASRLDPi-----AGERGADRKRSADREfGRDRRR---------STSVSParkfKKKENEPP-IRLLDDLFRKTKATPCIY 819 
EGT32529     419 RKRERSetppfSRGAGFMDVKKAKYEDeDRGRRRt--dSHSDDRRRELV-------KEEPP-KKSLEELFKKTIAQPSIY 488 
P91156       463 RKRKRSetppfSRGAGFMDEKKARNEE--RERRRe---GPRSEERRKVV-----VEEEEAP-KKSLDQLFKKTVALPPIY 531  Caenorhabditis...
XP_002430140 772 RHRDDRy-------ERKIEYDREKRDDyDDKRRRd--kDRNRRSTSAEPsrktKKKNEEETpVKLLDDLFRKTKATPCIY 842 
EDW55708     665 WLPLTPEAIAEKEAFRQKRIEE 686 
XP_008209853 885 WLPLTNEQIIVKEEMRRQHMAE 906 
EFN74327     818 WLPLTNEQIVVKEEMRRQHMAE 839 
XP_008193653 789 WQPLSPEEISMKQQQRLIRMEE 810 
XP_001949796 758 WSPLSIEQIAEKEDQRRKHLAE 779 
Q16HC7       699 WLPLTAEQITVKDEQRRKELAE 720  yellow fever mosquito
ETN60773     820 WLPLTTEQIAVKEEQRRKNMAE 841 
EGT32529     489 YLPLTDEQVAEKEAKKKEKNTe 510 
P91156       532 YLPLTEEQIAAKEAEKSAKGKE 553  Caenorhabditis elegans
XP_002430140 843 WLPLTPEQISVKEEMRRKHMAE 864 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap