Conserved Protein Domain Family
PHC2_SAM_assoc

?
pfam16616: PHC2_SAM_assoc 
Unstructured region on Polyhomeotic-like protein 1 and 2
PHC2_SAM_assoc is a natively unstructured region on Polyhomeotic-like proteins 1 and 2, that lies immediately upstream of the SAM domain, pfam00536. The function is not known.
Statistics
?
PSSM-Id: 465202
Aligned: 10 rows
Threshold Bit Score: 95.0274
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_015192619 138 NVGCTKRVGLf----HPDRSK-NAKSDGPKHRRRRSRKGSLQ--NLNKEtkkqqapt--plqslggSVSSPPPSh----- 203 
XP_006012376 796 NVSCSHQFRL-----KRKKLK-ELQEAAEARVRRRGPRRSSS--EIARA-----------------KIQGKRLR------ 844 
XP_003230712 144 NVGCTKRVGLf----HPDRNK-PPKQSATPHNRRRNSK---P--ALGKEskkqappa-laptsgpiSGSGSLQQqqhlss 212 
EHH14576     671 NVGCTKRVGLf----HSDRSK-LQKAGAATHNRRRASKASLP--PLTKDtkkqpt------gtvplSVTAALQLt----- 732 
XP_005617662 641 NVGCTKRVGLf----YPDESK-LQMAGITTHNRRRASKASLP--TLTKDtkkqpt------gimplSVTAALQLt----- 702 
XP_007253419 678 NVGCSKRIGLf----HPDRSK-TAN---------RWKRRSHSrgRRSTEakkqklsv--sqqsqgeSVSSPLPSq----- 736 
XP_014325432 695 NVGCTKRVGLf----RPEKNK-TTN---------RWRKRPNS--RSSIEakkqkmspprpqqtqggSISSPHASq----- 753 
XP_022533187 135 NVGCTKRIGLfprrpTPENPK-KQK----------ASNNTHH--NTSSEakkqihs---tqtamlgSVSSPRLSh----- 193 
OWK53279     135 NVGCTKRVGLf----HPDRSK-LQKPGGPPHGRRRSCKGTLP--PLSKDsk--------------------kqLn----- 182  Bengalese finch
XP_014353687 711 NVGCTKRVGLf----HSDRSKlLQKSQGSNHGRRRSRKSSLP--NLNKDpkkq----------mkiSVPAPLPLi----- 769  coelacanth
XP_015192619 204 -pSQGESSQCSDISSYEEPPSPLSAASSGA-PRRP---GD-----------RGPEApegHTRELPLLTQHFLPS 261 
XP_006012376 845 --SQEESSRGSDNSSYDEAVSPTSPGHAPL-RSPH---SErds------gtSGSVP---PPPDLLGINPVFLSS 903 
XP_003230712 213 rgGQEDSSRGSDNSSYEEPLSPLSASSSAS-RRRRrcpSE-----------REVELpdvRLRDLVAIGHHFLPS 274 
EHH14576     733 -hSQEDSSRCSDNSSYEEPLSPISASSSTS-RRRQ---GQ-----------RDLELpdmHMRDLVGMGHHFLPS 790 
XP_005617662 703 -hSQEDSSRCSDNSSYEEPLSPISASSSTS-RRRQ---GQ-----------RDLEFpdmHMRDLMGMGHHFLPS 760 
XP_007253419 737 -pSQGESSPCSDISSYEEPPSPLSAASSGPvGPPR---GV-----------TTPEP-----EELPLLSQHFVPC 790 
XP_014325432 754 -pSQEESSPCSDMSSYEEPPSPLSAASSGP-RAPA---PAsaqvpvhrqpsRTSEPeacAGRDAALLNERFLPN 822 
XP_022533187 194 -lSHGESTQCSDMSSYEEPPSPLSVASSGA-QRLR---RE-----------RGLEPgesHSRELPLLTQHFLPS 251 
OWK53279     183 -hSQEDSSRCSDNSSYEEPLSPISASSSTS-RRRQ---GErdm------elRDMELpdvHGRDLPGLGHRFLPS 245  Bengalese finch
XP_014353687 770 -hSQEDSSRGSDNSSYEEPLSPISASSSTS-RRRQ---NE-----------RDLDL-----QDLMGMGHHFLPS 822  coelacanth
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap