4A0E,6UID


Conserved Protein Domain Family
Yop-YscD_cpl

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pfam16697: Yop-YscD_cpl 
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Inner membrane component of T3SS, cytoplasmic domain
Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.
Statistics
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PSSM-Id: 465238
Aligned: 19 rows
Threshold Bit Score: 91.552
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4A0E_A              8 RFYQGKHRGVEVELPHGRCVFGSDPLqSDIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQEGLPV---PLGtlLRA 82  Yersinia p...
Q7N0V0              6 RFYRGLNKSIEVNLAEGRLAIGSDPLqADIVLVDEDVAPVHLILEVEPDSIRLLewAGEAAPSQNGEPL---SPGatLQA 82  Photorhabd...
6UID_A              8 RFYSGLNQGAEVSLGEGRVALGSDPLqADLVLLDEGIAAVHLVLEVDAQGVRLLewAEGCEPRQDGQAQ---VAGaiLQA 84  Pseudomona...
WP_011093646        5 RVLTGLHRGAALPLCGNAWRIGAADD-ADLVLYDPGIAPYHGQLEKAADGWALS---AQDGTLSNAEGHs-vEYInaLPP 79  Pectobacte...
WP_005763855        5 RVLNGQHQGAALPLIGEQWSIGSAQQ-QDLALDDSGVESLHCRLQRLDDSWTLN---AEEGAVCDEEGHs--QASvdLTL 78  Pseudomona...
Q87P23              7 RILSGVHSGVEVTLPEGALVLGSDDFiADLVLSDAGVEANHFTLVCDSESVMLR---GCQDVTINGENRavgESGieLER 83  Vibrio par...
Q2SH72              9 KLLSGPHAGAEMRLENRAYRVGAADD-CDIVLHDKLLPDLAFSLIVEFGVVRLQ--RDVESIALTHVGReieDLEiaIEP 85  Hahella ch...
MPITM:COCOR_01723  31 RVLSGAEAGKSHPLKQGTYVVGKNPT-CDIVLTDKAVSRQHLKLEVHDEHVVATdlGSHNGSFVEGLRFt--AME--LRP 105
WP_014397121       37 LVLSGPDAGQSYPLAPGRYRVGADAS-SDVIIADRAVSRSHLLLDVREDSIQAVdvGSRNGSFCEGMRFt--TLE--VRP 111 Corallococ...
mpitm:STAUR_5328   31 LVLSGPEAGSSHALTRAEYTVGKAPT-CDIVLSDKTISRQHLKLEVRDEHVLAIdlDSRNGSFCEGLRFs--QVE--LRP 105
4A0E_A             83 GSCLEVGFLLWTFVAVG 99  Yersinia pestis
Q7N0V0             83 LARQEVGPLLWAFCDQQ 99  Photorhabdus laumondii subsp. laumondii
6UID_A             85 LAGQTCGPLRWTFCDPQ 101 Pseudomonas aeruginosa
WP_011093646       80 GTPFALGQIWLCIVAAD 96  Pectobacterium atrosepticum
WP_005763855       79 NTAFMLGSVWLCVSPAG 95  Pseudomonas syringae group
Q87P23             84 HAVISVGVVKFALGYVE 100 Vibrio parahaemolyticus
Q2SH72             86 YGVYSLGLLHFCFGPAD 102 Hahella chejuensis KCTC 2396
MPITM:COCOR_01723 106 GSVITLGATELKLVPED 122
WP_014397121      112 GAVLTLGTTELKLVPEG 128 Corallococcus coralloides
mpitm:STAUR_5328  106 GSAITLGTTELKLVPED 122
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