5ZWO


Conserved Protein Domain Family
SF3A2

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pfam16835: SF3A2 
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Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
SF3A2 is one of the components of the SF3a splicing factor complex of the mature U2 snRNP (small nuclear ribonucleoprotein particle). In yeast, SF3a shows a bifurcated assembly structure of three subunits, Prp9 (subunit 3), Prp11 (subunit 2) and Prp21 (subunit 1). with Prp21 wrapping around Prp11.
Statistics
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PSSM-Id: 435601
Aligned: 85 rows
Threshold Bit Score: 75.2684
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ZWO_v         134 TIPVCKIATVKNPKNGSVGLAIQVNYSse-----vKENSvdSDDkak--vpPLIRIVSGLE--LSdTKQ-KGKKFLVIAY 203 Saccharomyces...
XP_003681267   138 LVPKCSVVSVRDESTNSEGVAIRVDYDed-----gAIADesIt--------PMIRIVSGLE--LQeAEK-KDRKYLAIAY 201
Q6FNA7         141 LVPTCHSTEVIDEK-GNKGIAVMLEFEesd--ktaDVLNadR---------PYARIVSGLE--LNtSAQ-KDKRFLVVAY 205 [Candida] gla...
XP_004181156   141 IVPIVKLINVKDAQ-DRFGFAIQVDYSqkvdteeaGVINtnQNFp------PMVRIISNLEm-KNtSKK-QDKKYLVISY 211
ybcl:Ecym_5283 160 VIPKCQIVKVRHLETNDIGMAIRVDYSve-----gVIVTd-EDEl------PFLRVISGLE--LPgTDN-DDKKYLMVAF 224
Q757M2         138 VVPKVQFTKVKDPETEHIGIAVRVDYKve-----gTAASgdEEEp------PCLRILSGLE--LPgAED-DDKKYLVVAY 203 Eremothecium ...
XP_002552600   135 IVPNYQVAKVRDPTTNSRGIAMRVIYTnp----epSEDGgdR---------PYVRIMSSLE---FtREE-SDKKYLIIAF 197
CCK72546       145 VTPACQVVPIRD--THRDGLAIRVEYS---------------GAphsrdppPFIRIMSSFE--LPgDDNnNKGKTLIIAY 205
Q6CJ05         133 IKPEVKVVKVRHPEKELFGIAVKVRYGke-----qQIHSaeKDEf-----iPYLRIVSDFE--LDkPDP-KNVKYLVVAF 199 Kluyveromyces...
XP_001706586   125 VLPKWHVDEVIHPESGKSGYCVSLWCP--------KMKVg----------iPRYRIVSTYDqsIE-PVS-PDKQYIVISC 184
5ZWO_v         204 EPFENIAIELP-PNeIlfsenndm-------dnnndgvDELNKKCTFWDAISKLY 250 Saccharomyces cerevisiae S288C
XP_003681267   202 EPFEIVAIEIPsDRqIkmdkle----------tirdsvDEVNSKSTFWDPVHGKF 246
Q6FNA7         206 EPYQNVAIEIPnDReIvmngyqpq-------sdeeifvDTLNRQCTFWIENQRQF 253 [Candida] glabrata
XP_004181156   212 QPFENISIEIPsDKdIflpykhqpe----gnykidaaiDSLNESCTFWNVNSKVl 262
ybcl:Ecym_5283 225 EPFENIAIEMP-NKeIimnnata---------glkksvDELNTRCGFWDRDDRAF 269
Q757M2         204 EPFENIAIEIP-DKeIvmskrq----------savesiDELNGRCSYWDRDDKAF 247 Eremothecium gossypii
XP_002552600   198 EPFKAIAIEIP-NEeIltnsaafn-------tsgaksvDDFNSKFTYWDEDNQTl 244
CCK72546       206 PPFNNVGVPLDaTRdVefdvdvhegnisvetptgkiavDRTNAQLTYWDAPNGLf 260
Q6CJ05         200 EPFENVGIQIP-SDeIelndydp---------sdslalDELNRKCTYWDQDNGDF 244 Kluyveromyces lactis
XP_001706586   185 HPYRSVGVCIMnQP-I----------------------DTAt-vYEEFDSLTETY 215
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