Conserved Protein Domain Family
T3SS_basalb_I
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pfam17001: T3SS_basalb_I 
Type III secretion basal body protein I, YscI, HrpB, PscI
T3SS_basalb_I represents a family of Gram-negative type III secretion basal body proteins I. It is the inner rod protein of the secreted needle. YscI is suggested to form a rod that allows substrate passage across the inner membrane of the needle protein YscF through it.
Links
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Statistics
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PSSM-Id: 407204
Aligned: 12 rows
Threshold Bit Score: 73.1761
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_013949108     33 DAVARFHEAMSGssgaqpeaqaaqpasetggvervqpEG--------------PSTPGDAILRGLGHMNEGFDHAMQQVN 98  Hyphomicrobi...
Q7NUW0           25 ADVDAFTRAMFG-------------------------HA--------------AQSPEEVAAGGLQTKSQAIGEAIDNAR 65  Chromobacter...
BAJ02213         12 SLVEKFSKLMELgtpaikla----------tdmvtlpGM--------------DNPLMKATKAFSSKSASDTVTVSPVDM 67 
jgi:Pmen_0029    27 ADVDLFSSLMRDngn--------------------taDQ--------------PSHLAAVIAETVNARMTSVDDLSRQAM 72 
jgi:Marme_1086   36 ADSNWFSSSIQPse----------------------nKQ--------------PENVADKIVSQLSGSSEHLQKLEDKAN 79 
Q6D5E6           53 QDVSWFSAALSSa-----------------------pMT--------------AGSGNSQWLGALAEKSQGLNGVFKSAE 95  Pectobacteri...
IEC:ABF-0019592  40 ADVTWFSAAMEPaa----------------------pAT--------------PTADNKAWLGALAEKSDNLENLLQKAE 83 
WP_013232835     34 AEAEHFKSMFEQylnkd---------------alrlkPN--------------THSLGSALAQRTSSLAAEVKQDQLYVS 84  Herbaspirill...
Q2SH68           28 AALERFQQSLQPqpda-------------------sahStsdgspvilgveasENTLGDKVLQGMQSVKSGYDQQMEAMQ 88  Hahella chej...
Q87P27           25 GLSERFEQAMSIp------------------------EG--------------NNGLEGGLLENISELKNTIDNAKSSLQ 66  Vibrio parah...
Q9I315           26 AHVAEFERAMGG-----------------------------------------AGSLGGDLLSELGQIRERFSQAKQELQ 64  Pseudomonas ...
Q7N0U5           25 ENIASFEHAMSN--------------------------Q--------------DQGIENNLINELGQLRQQLTQAKQDLE 64  Photorhabdus...

WP_013949108     99 DVLSKTkpgEmmNTADLMKVQMSFTQASVQQDVIGKVVGKATQNLDTFLKNQ 150 Hyphomicrobium sp. MC1
Q7NUW0           66 ATTGVL---N--NPAEMLAAQSKLLHSIVEVDLVAKTAGALSQGVNKLVSMQ 112 Chromobacterium violaceum
BAJ02213         68 TNVEGVsysP--SPEAMLGGQMLMGKAVIEVDLVAKTAGSLSQSINKLVNMQ 117
jgi:Pmen_0029    73 RHMKEAvtgN--DVSAITDMSRALSQYSLQMAVTTKVVSKTGQALEKLTNMQ 122
jgi:Marme_1086   80 RAIKKAgvtG--DPMDVTDANRSLSSFYLESLLTTKLVSKGAQTIEKLTSLQ 129
Q6D5E6           96 RDVSQAmrsN--NPKDVLDATRTLSSFYLESLLSAKLVAKSVQSLEKLTNLQ 145 Pectobacterium atrosepticum
IEC:ABF-0019592  84 RQVGKSinsN--NPKDVMDATRTLSSFYLESLLNAKVVAKSVQSLEKLTNLQ 133
WP_013232835     85 RLLEQAtrtG--DSMQLMKAMMALSDYQIRVQTISKCVSKASTSVDSLTKLQ 134 Herbaspirillum seropedicae
Q2SH68           89 LTLNSAd-pL--NMSDMLKLQMDLAQLTLQGELISKTVSKSTQNLDTLLKSQ 137 Hahella chejuensis KCTC 2396
Q87P27           67 DSMKMVg--D--DPAQLLQMQWALTRITFQEELIAKTVGKTTQNVETLLKAQ 114 Vibrio parahaemolyticus
Q9I315           65 MEL--StpgD--DPNSLMQMQWSLMRITMQEELIAKTVGRMSQNVETLMKTQ 112 Pseudomonas aeruginosa PAO1
Q7N0U5           65 TQL--AvsgS--DPNSLMQMQWSLMRITLQEELIAKTVGRLNQNIETLMKAQ 112 Photorhabdus laumondii subsp. laumondii
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