Conserved Protein Domain Family
HTH_micro

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pfam17007: HTH_micro 
HTH-like
This is a family of microsporidial sequences whose function is not known. It is possible that the proteins are DNA-binding as there is distant homology to helix-turn-helix families at the N-terminus.
Statistics
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PSSM-Id: 374932
Aligned: 7 rows
Threshold Bit Score: 390.694
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8SUJ1        13 NLKEKIFQFGIYGAKLGMLDGSEVEMVIGEPWVEIITADAVEGLKRN--FTTDCLRTETNRFMVENfswsdlY-VRMGSL 89   Encephalitozoo...
ELA41432      23 NSRTKSFSYGIYGKQISSLTNKEIEEARTKPWVEILSPEQLDEFVSN--FTLSPFPSYVSKNIPEN------YiIRMNLQ 94  
ELQ76257     103 NTIRDRLNYG--------------------------STAEYGTVGKS--AGSSVQQLSPDDKYLLRlllvnlY-VRMNTV 153 
XP_008073372 103 NSIDGRLNYG--------------------------CTAEYDAVDKE--AYAIGLQLSCEDKYILRlllgnlY-VRMNTV 153 
EED44022      12 ELTNKILEGGIYGQKISNFTKEEIEKLYACNGIEFLTEAQVKDIQND--FMRSNLNKPEDLNSIEN--------IRFNIS 81  
EOB15462       3 ELMKKVFKFGMYGKPITFLTKSEINSLKKYHWIEFLDKNELDELENNieFVPSKKTDLNDd----------lY-VRMNFT 71  
XP_002996796   3 KYKNELLYFGLYGTSLSNYKKEEIKLFCNTDFVDIFYKADVSKIEND--FNGDTITKLKDYDTIIKdy--dlLnIRIKFN 78  
Q8SUJ1        90 AWKDYLTSGTFNFTSKEYFLIMSLLIEAR-RYVDNVELR-KLNLDPKKTHYCINRLARKGFIEyKTSEEAQkknFIYKVR 167  Encephalitozoo...
ELA41432      95 AWRAYLFGPNFITTNKFYFQMVDYIVTNP-DRAPCSLLRsKFNIDPKTMHYLCKKLSERGIIE-EIKQGKE---TVIKLN 169 
ELQ76257     154 AWKEHLTNGSFNFTSKEYYYVFDMLIRMN-EYVSVSNMRvTLGIEPKKMFYIIKKLVSLGYID-KTAEDNK---IVVKIR 228 
XP_008073372 154 AWKEYLTNGSFNFTSKEYYYVFDMLIRMN-EYVSVANLRaTLNIEPKKMFYIIKKLACLGYID-KTVEDNK---IVVRIR 228 
EED44022      82 YWTK-LTFGKTRPKNKEIYDIMNFIVQNKmRNVTAKLIKaELNIEPKTISYALKLFKKHNLIKiIDKNIIK---YIFNYN 157 
EOB15462      72 YFKNLISDSRFKEISS--FKIFNHLLISG-DYVKQADLQhIGQVDTKKVSYVLKILRKSSFIKqKIIKNIS---YV---- 141 
XP_002996796  79 IFKERLL--RYKFKEDYPYRVIDFLLKAD-GFVKSAEIReHLHLDSKKLFYVAKKLRCKEVLEqKRGNGAH---WLIKIN 152 
Q8SUJ1       168 AivDERG---------FVMRRVAEKQlldtnrad----------lpgkkrmFEYRIDIGLYDNIREMILNSKDGIITEDL 228  Encephalitozoo...
ELA41432     170 KvkDMSKqrndehpifSEEKSIDVSK-------------------------MVFYQNIPLIDQIKMHAKCRENGLGTKEL 224 
ELQ76257     229 R--DESG---------NVVKGRPKEKrrsinsedtitdtsvtnsfdeqhigMDILIGVPLITQIKKFIERSRTGVCSKDI 297 
XP_008073372 229 R--DAHG---------DVVKGQQKEKrrsinsedtttdmsttnsfeekhigMDILIGVPLITQLKNFIEGSRTGVCSKDI 297 
EED44022     158 Sleinannnifnd--------------------------eiqyilpkkiinYSYE------ELLKKDIYNTCEGITSIEI 205 
EOB15462     142 --------------------KLDVDSlfnrnkkq----------yplpiipREYFREVPIYYEIKRKLMNTEVGLTSSDI 191 
XP_002996796 153 K-----------------------DKlfenkgley-------tqydspfipIKFCTEIPILDQIKKLIGETYIGITTEDM 202 
Q8SUJ1       229 KNKLGVSSKIGYKLLNKIFNEEKDAVTRTEEFKGRIRRYRYHvgTKSSEEAFQ------------EGGDGTRTVGYITSE 296  Encephalitozoo...
ELA41432     225 NDITGISLKNALKHLQKLCEAHPDYFKMVNSIEHGHTTFKVF--SIENLNKRNqrklkmmqktveIENDDPDVDPILTSK 302 
ELQ76257     298 QDRFGIKLKIGLKLLNKISDRMEGSIKTVEEFEGKIKRTKFY--NVNELSKLKerkr-----qrmIAREQ-SVEEGITME 369 
XP_008073372 298 QDRFGIKLKIGLKLLNKITDKMEGSIKTVEEFEGKIKRTKFY--NVNELSKLKerkr-----qrmIAREQGANEEGITME 370 
EED44022     206 KNKYGLDVKQGLKDLIYLNNHNSNLYVSEYLLRYKSTVLAFF--TKENHEKFNlikk-----hrlQKGNGLAEIQTITRN 278 
EOB15462     192 RRDYGVSVKRAHACLKKLEIEREKEIAIKQVFDGKTRKHLFY--KVENSELVD---------------DDLKEKGLITVN 254 
XP_002996796 203 QKQFGLSIRQSLHYLNKIIELNSNRYKWKEIFIGRVKRRLFY--LVDNADAPNy--------------EEAETKKFITIN 266 
Q8SUJ1       297 ERVRAIRKLMSTSPI-LQLDKRTYEKLQELTGWRYEFDRRTIIKSAVLAGFKIYKQKRGKEgkcSRYMIMRNEMVESdiR 375  Encephalitozoo...
ELA41432     303 DRQEVLKIIAKKHGH-FILSKQIFEEISRMTGYPYNIDRKNLISNAEAAGLKVFKLSDPPT---RRYVIALPHCDES--I 376 
ELQ76257     370 DRINAIEQILSVKKA-FVLDKEFFKDFRSILGCKYTLDRRTVINAAIKGGFNVYKLHDDAQg--AKFVVARKDVLQDdpS 446 
XP_008073372 371 DRINAIEQILDVKKA-FVLDKEVFKDFKSILGCRYTLDRRTVINAAIKGGFNVYKLHDDAQg--AKFVIAHKDVQQDdpL 447 
EED44022     279 DKEYLIREELKKNKGiFVLNAENVEKLSAIAGVNYTFDKKNLLKIIKNMNVNILELNQTT----NKRIVYTNDYTEEe-V 353 
EOB15462     255 DRICALKQLLKDRKW-INTCEETFIKFRDILGSKYMPDRKTMISTAIKANLKVFNIRGTHSv--SSWLIANNDVQLSdiV 331 
XP_002996796 267 DRIDALNQMLEEKRG-FVISEDTQKQFQHKMNYSYFPCKKTIMSTALKAGHKIYALMDTSE---RKTLIIHKDVDISs-Y 341 
Q8SUJ1       376 ALDVSNC------DFQESMSEFQRKIYNIFVNSPKFVEMDNGYIPLREERLKLLYRFLvn--hMTSRGDES------LRF 441  Encephalitozoo...
ELA41432     377 LNQYVSAhesipkNESDEENKFYKSVKKYFMNISKCIIADNGYCDNSDINIGILYEHIkeihrTNNSKKKSkvriipLFI 456 
ELQ76257     447 VTNYYPSr-----KTASTLTPFQSQLHKFFVTHSKFAEIDNGFEPVLNKRVKALYSFL------RRLKENE------FYF 509 
XP_008073372 448 VLNYYSPk-----RTAVSLTPFQAQIHKFFVTNSRFTEIDNGFEPSMNRRVKALYLFI------ERVKDNE------FYF 510 
EED44022     354 KNMFLNK---------EKVAKYLTILKYNIFSNKEIHAIDNLWQKDECERNKIFLTIL-------NTSENF------IQF 411 
EOB15462     332 QNKI---------KAAPKDNEFSKKVMSKYVKVPDFIAIDNLYKIKISNRFDIIFNFI-----YKNSKHEC------LQL 391 
XP_002996796 342 LNNNSNE------KEIDFNNKLEKSFYHKFVLNEIFLPTDNLFITDDRERITIFFDFL-----VKNSVNGY------TVI 404 
Q8SUJ1       442 dweVVREMEFNLLLSIVpFNRIGFRESL 469  Encephalitozoon cuniculi
ELA41432     457 ---ILIRLPIVLLMSLI-FVLYSLIIKL 480 
ELQ76257     510 ncdVLQSMSLGLFFKLVsFKRYKFLGEL 537 
XP_008073372 511 dcdLLRFMSLGLFFKLVsFKRYKFLAEL 538 
EED44022     412 ttlNILEMLLKDYLAIIkVSNIYFLEYL 439 
EOB15462     392 sdeFLMNRSLLFLFNLVpFYKINFVKKL 419 
XP_002996796 405 skeLIYKMNLKLLFNVIpVEIPNILLKI 432 
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