3M6U


Conserved Protein Domain Family
RsmF_methylt_CI

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pfam17126: RsmF_methylt_CI 
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RsmF rRNA methyltransferase first C-terminal domain
This is the first of two distinct C-terminal domains of the 16S rRNA methyltransferase RsmF. It is necessary for stabilising the catalytic core, pfam01189.
Statistics
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PSSM-Id: 465357
Aligned: 106 rows
Threshold Bit Score: 63.2162
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3M6U_B                325 GFLEE--AGL------T-L-----E-GPVLDRAGHLYLLPEG----L-PTLLGLKAPAPGLYLGKVQKGRFLPARALALA 384 Thermu...
cebbi:LBUCD034_1199   326 QFAKA--TLK------N-V-----HfDKLVVFKDHLYSVPEN----T-PNLSGIKIVRLGLEMGTFKKNRFEPSYGLALA 386
OTooleUCC:LRC_09000   328 NFAKE--FEL------EgF-----SlSNLKVLGDHLYLYQES----W-PDISRLKFIRPGFLLGTFKKKRFEPSYGLALA 389
Q03FP8                329 TFAKA--FLKds---nY-F-----DlAHLMVQKDRLYYQSER------LDLEGLRYIKPGLELGEFKKNRFEPSQSLLMA 391 Pedioc...
Ziola:PECL_1026       323 DFKQS--FLSd-----H-I-----EiKNVFAVGNILYSR-NE----E-IDLSKLRYIKPGWELGAFKKNRFEPSLSLVLA 383
OKZ63459              336 DFAKQ--VFT------N-EpldiaM-DSLTVFGDELYALPAE----T-PSLKGLKVIRPGLHLGTLKKNRFEPSYALAKA 400
Prjna32935:ECBG_01762 327 AFRKEfpFLQ------A-L-----N-ATPQLLGENLWLVPEE----M-PSLKGIKFMRPGLHVGVVKKNRIEPSYALALA 388
jgi:Theco_1457        358 AFAAE--ALPgfspdeD-L-----PgGGPLAFGQQLYWLPDGggrfApHLLDGLRVLRPGLHLGDLPKDRFEPAHALALH 429
WP_117968897          325 QFEKEf-LNT------E-L-----D-GEFCLFGEQLYLKPK-----C-IDVDKIKVVRNGLNLGIYRKNRFEPSYALCLA 384 Firmic...
Q8DZV3                308 QFAQDh-LKI------D-L-----N-GVLDVFGDQLYLLPNG----L-PDLSKLKIARNGLHLGTFKKNRFEPSFALGMA 368 Strept...
3M6U_B                385 F 385 Thermus thermophilus HB8
cebbi:LBUCD034_1199   387 L 387
OTooleUCC:LRC_09000   390 L 390
Q03FP8                392 L 392 Pediococcus pentosaceus ATCC 25745
Ziola:PECL_1026       384 L 384
OKZ63459              401 L 401
Prjna32935:ECBG_01762 389 I 389
jgi:Theco_1457        430 L 430
WP_117968897          385 L 385 Firmicutes bacterium AM55-24TS
Q8DZV3                369 L 369 Streptococcus agalactiae serogroup V
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