Conserved Protein Domain Family
Chor_lyase

?
pfam04345: Chor_lyase 
Chorismate lyase
Chorismate lyase catalyzes the first step in ubiquinone synthesis, i.e. the removal of pyruvate from chorismate, to yield 4-hydroxybenzoate.
Statistics
?
PSSM-Id: 113128
View PSSM: pfam04345
Aligned: 3 rows
Threshold Bit Score: 247.922
Threshold Setting Gi: 81636915
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81539466    1 MPSNALWLRADQLSSVSPAVLDWLFDEGSLTRRLTALADgAFRVEPLLEGWQ---TLRDDECQGLDVPTGSsgwVREVYL 77
gi 109895437  11 ALNRVTWQQPDDIEFPAPLAQQWLLEQGSLSRRMATQCE-HLTVDLLSNQIMladTLSYDETQLLASEEYL---LRQVII 86
gi 81636915    7 LLQNATWQPSTDMQ-LPLSISSWLELSTSLTTQLKQAFG-EVNVCVLAESWI---TTLNENERQFFPKQACpcwCREVIL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81539466   78 HGHDRPWVFARSVAARSALEGSGFDLALLGTRSLGELLFSDSAFERGPIEVCRYPAAglpaevrAEGLWGRRSRFSRGAL 157
gi 109895437  87 YGDQQPWVFGHTLIPRSSMHNQPFDFTQQGKIPLGLTVFSADNVKRDALQVGWVETE-------LGRLLARRSRLWMNNK 159
gi 81636915   82 KSQDIPLIFARTLIP-ASLLTQHSELQQLGNRALGEWLFMQSDRIRQKLELTHDKNT---------ALYARRALMSIGAE 151
                        170       180
                 ....*....|....*....|
gi 81539466  158 GVLVAEVYL--PRLWDQAGI 175
gi 109895437 160 PMLVTELFLatSPIYSKERV 179
gi 81636915  152 NMMVAELFLt-PQIFTRVVK 170
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap