Conserved Protein Domain Family
Orthopox_C10L

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pfam07020: Orthopox_C10L 
Orthopoxvirus C10L protein
This family consists of several Orthopoxvirus C10L proteins. C10L viral protein can play an important role in vaccinia virus evasion of the host immune system. It may consist in the blockade of IL-1 receptors by the C10L protein, a homolog of the IL-1 Ra.
Statistics
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PSSM-Id: 115660
View PSSM: pfam07020
Aligned: 4 rows
Threshold Bit Score: 28.8877
Threshold Setting Gi: 81936160
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75546408  1 MSGTPRYGMYDQGGNYKGTANDPGGACKRPhslSSGGGssdgsgwgsMWGGPPAKKHCGGGGGGIFagmyggsGGSGGIC 80
gi 75546520  1 MPGEGQYHIYSHSGTSKGFASTPGGAVKRP---SSGSG---------IWGPLEKRMCVGGGSGGFW-------GGSKSLS 61
gi 140728    1 MSSKGG----SSGGMWSVFIHGHDGSNKGSktyTSGGGg--------MWGG----------------------GSSSGVK 46
gi 81936160  1 MSSKGG----SSGGMWSVFIHGHDGCSKGSktyTSGGGg--------MWGG-----------------------SSSGVK 45
                       90
               ....*....|....*...
gi 75546408 81 GGVKGGVSGGINGGISKI 98
gi 75546520 62 GGVNGGVNGGVNGGCGKI 79
gi 140728   47 S----GVNGGVKSGTGKI 60
gi 81936160 46 SGVNGGVNGGVNSGVNKI 63
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