Conserved Protein Domain Family
AP_endonuc_2_N

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pfam07582: AP_endonuc_2_N 
AP endonuclease family 2 C-terminus
This highly-conserved sequence is found at the C-terminus of several apurinic/apyrimidinic (AP) endonucleases. in a range of Gram-positive and Gram-negative bacteria. See also pfam01261.
Statistics
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PSSM-Id: 336748
View PSSM: pfam07582
Aligned: 124 rows
Threshold Bit Score: 68.2867
Threshold Setting Gi: 497636936
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 122976148 275 DFEEIVRALNRTGYGGPLSVEWEDSGMDRVHGARESAAFVRr-LDFEPSGVAFDA 328
gi 524219131 267 yWKDIFSALNLIGYDHVISIEHEDSIMEAKEGLVKAIEFLQntMIINKKPTSMWW 321
gi 503252343 268 KWKTIFSVLQATGFDGVISIEHEDQLASRDEGLQRAIDTVKs-AILKDKPDEMWW 321
gi 909711277 267 HWKDIVSTLRMVGYDGTMSIEHEDSLTSSREGLEKAVSFLEr-AIFREQPGEAYW 320
gi 521281867 268 yWKDLVSTLRMVGYDGTLSVEHEDSLTSAREGLEKAIGTLDe-AIFETQPGEAYW 321
gi 909711310 267 fWKDIVSTLRMVDYDGVLSIEHEDSLTSPNEGLEKAIDVLDr-AVFETTPGDAYW 320
gi 506243435 267 HWRDVVSTLRMVGYDGALSIEHEDSLTSANEGLEKAVDLLDd-VIFETTPGEAHW 320
gi 433290278 267 HWKDVVSTLRLVGYDDAISIEHEDSLTSSEDGLEKAIDFLAp-IVFEGEPDapfw 320
gi 503332139 265 wWKEFVSTLRMFGYDGVLSIEHEDSLLSPDEGLNKAVEFLNs-VVLKETPGAAWW 318
gi 506377331 265 wWKEFVSTLRMHGYDGPVSIEHEDSLLSAEEGLTKAADFLNg-LLPREPPGQAWW 318
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