5FDY


Conserved Protein Domain Family
V-set

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pfam07686: V-set 
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Immunoglobulin V-set domain
This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.
Statistics
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PSSM-Id: 336766
View PSSM: pfam07686
Aligned: 64 rows
Threshold Bit Score: 50.9209
Threshold Setting Gi: 584905
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5FDY_A         7 TVPAT-LNVLNGSDARLPCTFNSayT-VNHKQFSLNWTYQEANnASEEMFLQFRmkiINLKLERFq-dRVEFSGn----p 79
gi 2842765    25 ETPQDvLRASQGKSVTLPCTYHT--S-TSSREGLIQWDKLLLT--HTERVVIWP---FSNKNYIHg-eLYKNRVsisnna 95
gi 81914542   33 lvpyN-STGVLGGSTTLHCSLTS--N-ENVTITQITWMKKDSG-GSHALVAVFH---PKKGPNIKepeRVKFLAaq---q 101
gi 74762116   38 IEALP-SSAAEGKDVLLLACNIS--E----TIQAYYWHKGKTA-EGSPLIAGYI---TDIQANIPg-aAYSGREt----- 100
gi 156630480  38 IASAP-FEVAEGENVHLSVVYLP--E----NLYSYGWYKGKTV-EPNQLIAAYV---IDTHVRTPg-pAYSGREt----- 100
gi 115976     23 RDNET-IWGVLGHGITLNI--PN--FqMTDDIDEVRWVR------RGTLVAEFK---RKKPPFLIs-eTYEVLA------ 81
gi 115977     23 RDSGT-VWGALGHGINLNI--PN--FqMTDDIDEVRWER------GSTLVAEFK---RKMKPFLKs-gAFEILA------ 81
gi 584905     25 KKNIT-ILGALERDINLDI--PA--FqMSEHVEDIQWSKGKTK------IAKFK---NGSMTFQKd-kTYEVLK------ 83
gi 160370002  28 TNALE-TWGALGQDINLDI--PS--FqMSDDIDDIKWEKTS----DKKKIAQFR---KEKETFKEk-dTYKLFK------ 88
gi 1877203    38 iESTP-FNVAEGKEVLLLVHNLP--Q----HLFGYSWYKGERV-DGNRQIIGYV---IGTQQATPg-pAYSGREi----- 100
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
5FDY_A        80 SKYDVSVMLRN-VQPEDEGIYNCYiM--NPPDRHRGHGKIHLQVL 121
gi 2842765    96 EQSDASITIDQ-LTMADNGTYECS-VslMSDLEGNTKSRVRLLVL 138
gi 81914542  102 DLRNASLAISN-LSVEDEGIYECQ-I--ATFPRGSRSTNAWLKVq 142
gi 74762116  101 VYPNGSLLFQN-ITLEDAGSYTLR-T--INASYDSDQATGQLHVH 141
gi 156630480 101 ISPSGDLHFQN-VTLEDTGYYTLQ-V--TYRNSQIEQASHHLRVY 141
gi 115976     82 ---NGSLKIKKpMMRNDSGTYNVM-Vy-GTNGMTRLEKDLDVRIL 121
gi 115977     82 ---NGDLKIKN-LTRDDSGTYNVT-Vy-STNGTRILDKALDLRIL 120
gi 584905     84 ---NGTLKIKH-LERIHEGTYKVD-Ay-DSDGKNVLEETFHLSLL 122
gi 160370002  89 ---NGTLKIKH-LKTDDQDIYKVS-Iy-DTKGKNVLEKIFDLKIQ 127
gi 1877203   101 IYPNASLLIQN-IIQNDTGFYTLH-V--IKSDLVNEEATGQFRVy 141
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