Conserved Protein Domain Family
V-set

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pfam07686: V-set 
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Immunoglobulin V-set domain
This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.
Statistics
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PSSM-Id: 311561
View PSSM: pfam07686
Aligned: 68 rows
Threshold Bit Score: 47.8564
Threshold Setting Gi: 584905
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1HNG_A          5 TVWGALGHGINLNI-----P---NFqMTDDIDEVRWER-----------GSTLVAEFKR-----KMKPFLK-SGAFEILA 59
gi 81917809    36 PPMVAEGGNSVLFVh---eM---PL----NVQAFYWYKqrd------ptKSYEVARYLT-----PTNESSK-MPQHSGRK 93
gi 123792968   42 PPQVAEDNNVLLLVh---nL---PL----ALGAFAWYKgnt------taIDKEIARFVP-----NSNMNFT-GQAYSGRE 99
gi 81917468    42 PPNVVEEKSVLLLAh---nL---PQ----EFQVFYWYKgtt------lnPDSEIARYIR-----SDNMSKT-GPAYSGRE 99
gi 74762116    42 PSSAAEGKDVLLLAc---nI---SE----TIQAYYWHKgkt------aeGSPLIAGYIT-----DIQANIP-GAAYSGRE 99
gi 156630480   42 PFEVAEGENVHLSVv---yL---PE----NLYSYGWYKgkt------vePNQLIAAYVI-----DTHVRTP-GPAYSGRE 99
gi 108935831   31 PVKGSLSGKVVLPChfstlPtlpPNyNTSEFLRIKWSKmevdkngkdikETTVLVAQNG-----NIKIGQDyKGRVSVPT 105
gi 205830916   36 PVLAPLGGILELSCq---lS---PP-QNAQQMEIRWFRn---------rYTEPVYLYRNgk-dlHGETISKyVERTELLK 98
gi 387942538   41 PLLAIVGQDKELPCk---lS---LN-ISAEGMELRWYRd---------kPSSVVHVYKNgedvyDEQMVEY-KGRTSFNG 103
gi 614252840   44 RVTANVGQDVVLRCh---lS---PC-KDARSSDIRWIQq---------rSSRLVHHYRNgv--dLGQMEEY-KGRTELLR 104
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
1HNG_A         60 ------NGDLKIKNLTRDDSGTYNVTVySTNGTRILNKALDLRI 97
gi 81917809    94 tv--fySGSLLIRNVTQADSGVYTLLT-FNTEMQSELTHVHLEV 134
gi 123792968  100 ii--ysNGSLLFQMITMKDMGVYTLDM-TDENYRRTQATVRFHV 140
gi 81917468   100 ti--ysNGSLFFQNVNKTDERAYTLSV-FDQQFNPIQTSVQFRV 140
gi 74762116   100 tv--ypNGSLLFQNITLEDAGSYTLRT-INASYDSDQATGQLHV 140
gi 156630480  100 ti--spSGDLHFQNVTLEDTGYYTLQV-TYRNSQIEQASHHLRV 140
gi 108935831  106 hpddvgDASLTMVKLRASDAAVYRCD--VMYGIEDTQDTMSLAV 147
gi 205830916   99 hdigkgKVTLRVFKVTVDDDGSYHCV--FKDGIFYEEHITEVKV 140
gi 387942538  104 shvargEAAVKIHNVTVFDNGTYHCV--FKEYTSHSQATLWLKV 145
gi 614252840  105 dglsdgNLDLRITAVTSSDSGSYSCA--VQDGDAYAEAVVNLEV 146
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