3IC1,1CG2,2F7V,2POK,3MRU,1VIX,3IFE,3N5F,3GB0


Conserved Protein Domain Family
M20_dimer

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pfam07687: M20_dimer 
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Peptidase dimerization domain
This domain consists of 4 beta strands and two alpha helices which make up the dimerization surface of members of the M20 family of peptidases. This family includes a range of zinc metallopeptidases belonging to several families in the peptidase classification. Family M20 are Glutamate carboxypeptidases. Peptidase family M25 contains X-His dipeptidases.
Statistics
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PSSM-Id: 336767
View PSSM: pfam07687
Aligned: 184 rows
Threshold Bit Score: 32.698
Threshold Setting Gi: 81590956
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3IC1_A       176 NGRRGSITGNLYIQGIQGHVAyphlaenPIHKAALFLQELTTYqwdkgneffppTSLQIANIHAGTgSNNVIPAELYIQF 255
gi 81590838  208 LEVKNLCGGHSGAEIHKNRLN-------ANKVMSEVISEIKKN-----------FDMKLCDIKGGS-KDNAIPRECYFDI 268
gi 81590830  212 LGVKNLIGGHSGMEIDKGRMN-------ANKILTELLVEVRKN-----------FEIKLCSFKGGT-KENAIPRVAMVEV 272
gi 81580639  207 LYVGGLKGGHSGMEIDKQRGN-------ANKVLGRVLRDLSAH-----------TEFNISEVHGGL-KTNAIPRESVATL 267
gi 81766669  206 IMLRGLKGGHSGMEIDKQRGN-------SNKLMGRVLNDINAN-----------CDIRLISINGGS-KVNAIPRECDTLL 266
gi 81766590  205 LEILGFKGGHSGMEIHKQRGN-------ANKLMGRILYDLSKE-----------VDFNIASIKGGS-KHNAIPQYCQSII 265
gi 81590956  209 IKISGLRGGHSGEDIHKGRAN-------ANVLLANLLNLLREK-----------INFLISDLKGGN-FRLAIPREAHVTV 269
gi 81556204  197 ILFKGLKGGHSGADIHLDLAN-------SLKLMFFALFEIKAN-----------LNFEIEGIFGGN-SSNAIPIEAKALI 257
gi 81791310  207 IRVSGLRGGHSGMDIDLGRGN-------ANKIMNRLLQMGREH-----------HGLLLASIDGGS-LRNAIPRESVALV 267
gi 159109826 228 LHLSKLSGGHSGCDIHLYRAN-------TIKLMARLVSKIPG--------------ARLCALSGGS-AHNAIPGSCQAVI 285
                         90       100
                 ....*....|....*....|....*....
3IC1_A       256 NLRYCTEVTDEIIKQKVAEMLEKHNLKYR 284
gi 81590838  269 AIDKSSSQNFMNKSKEIFENFKSKYIEQD 297
gi 81590830  273 AVMKKGLKNFRIKLIEIMKNIIDKYILIE 301
gi 81580639  268 LIRTEDVGQVEEKLESWTRVLQEEMRAVD 296
gi 81766669  267 AVKKEDVKKLEELIQKWDSILKDEYHAND 295
gi 81766590  266 AVKKEEVEKVKEICTALEKDLKAEYRIGE 294
gi 81590956  270 ALEEKDIDILKNIVKNFESEAKKIYEETA 298
gi 81556204  258 FIDDNDYDLLNKELKLFVLKVKSAYS-LE 285
gi 81791310  268 AVPSAQKVAFLDELHSLASAIGLELNGVD 296
gi 159109826 286 TCR---SDITPAHIAKIWDEIYIAYKPTD 311
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