Conserved Protein Domain Family
DUF1604

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pfam07713: DUF1604 
Protein of unknown function (DUF1604)
This family is found at the N-terminus of several eukaryotic RNA processing proteins.
Statistics
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PSSM-Id: 336777
View PSSM: pfam07713
Aligned: 81 rows
Threshold Bit Score: 98.002
Threshold Setting Gi: 145347653
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124447367   31 KDNFYNMEARDEKGHKRFHGAFEGGFEAGFKNTVGSKQGWAPQKFISSRTNRAKYNNQ-TIKDYMDEDDIGRQklgvnvT 109
gi 74665865    35 GVPVWKQEARDERNRKRFHGAFTGGFSAGYFNTVGSKEGWQPKSWKSSRNENKSVHGM-TIDDIMDEEDRADQ------E 107
gi 75151256    38 TLPAWKQEVTDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFTSSRQNRAGARKQ-SISDFLDEDEKADMegk-slS 115
gi 303285360   37 ALPVHKQEATDAEGRRRFHGAFTGGFSAGYYNTVGSKEGWAPSAFRSSAGDRAGAKKTsTAFDFMDEDEREELaat-alE 115
gi 255081887   36 ALPVHKQEATDAEGRRRFHGAFTGGFSAGYFNTVGSKEGWTPQQFTSSRANRAKV-TQ-TAEDFMDDDEREEMrat-alE 112
gi 168059373  116 VAP-WNQEVTDSEGRRRFHGAFSGGFSAGYYNTVGSKEGWAPTAFTSSRQSRADKKSQ-AAYDFMDEDEKAEYdak-nlE 192
gi 255541870   38 TLVPWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQSFTSSRKNRAEVKQQ-NILNFLDDDERAELedr-slG 115
gi 573947555   40 ALPAWKQEVRDEEGRRRFHGAFTGGFSAGYYNTVGTKEGWTPQTFTSSRKNRAEVKKQ-SVYSFLDEEDIKDMggn-alE 117
gi 302760881   41 QQPVWKQDARDSEGRRRFHGAFTGGFSAGYFNTVGSKDGWEPKTFKSSRGSRADMRQH-SAYDYMDDEERREMdsk-qiG 118
gi 302835151   39 TLPIWKQEATDEQGRKRFHGAFTGGFSAGYYNSVGSSEGFQPASFKSSRSSRQAVVQQ-SVDDFLDEDEREARsrt-vlT 116

                  ....*
gi 124447367  110 IQPEY 114
gi 74665865   108 LSKVY 112
gi 75151256   116 ASSQF 120
gi 303285360  116 ARQDY 120
gi 255081887  113 ARDDY 117
gi 168059373  193 VRSDF 197
gi 255541870  116 TSSQF 120
gi 573947555  118 TSQQY 122
gi 302760881  119 TAQEF 123
gi 302835151  117 VKNDY 121
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