Conserved Protein Domain Family
FBA_2

?
pfam07735: FBA_2 
F-box associated
Most of these proteins contain pfam00646 at the N terminus, suggesting that they are effectors linked with ubiquitination.
Statistics
?
PSSM-Id: 311601
View PSSM: pfam07735
Aligned: 363 rows
Threshold Bit Score: 32.5755
Threshold Setting Gi: 341896926
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75015234  217 EVNIT-------------HLsl-tyPEWVTNRNILNFhCE--TIN-----LeDPniNGigLNSFIKTWM-KTD-KKKLKR 273
gi 341886061 130 NCHIDlpqnle--ylsikNV-----NF-VKLGQILKMnCK--NIIlentnL-TN--HD--AFVFLKKWI-SMKwNLNLEY 193
gi 341895643 194 NFQKIciqnfe--klhllN-------HEISMDTVLLInAS--TMA-----I-TTkfREkeLNMYLKLWK-NGA-NPRMRC 254
gi 341880821 190 SFRKYlrhsid--evilsG------DVKTTINEIYYMnCIsaSIHnp--qI-ST--ST--LNTLLKVWT-EGW-TPRMKL 252
gi 341885636 141 NFQAVlarpfny----------lafvypMSLKDILSInCKdt-------eIwSTrfLEdgMTELLNRWI-NGW-NPLLEK 201
gi 268553063 117 DFQHDlpktlkhfycsysK-------W-MTLDQLISQnFE--FVSvyksgI-TN--QD--MIAYLEKVL-AGE-LPKLNY 179
gi 341897418 212 DFRCElp---------rdLKffscsSDWLTKADLLNMnYElidi--eakkI-SY--QD--ISDFTTKCI-EGG-LPALQY 273
gi 308478830 186 NFQLIlprsik--afeilQ------SDFVTLDQLSNFdCE--FIRlcntkI-SN--QE--LNQFFKNWM-TSKsNINLQN 249
gi 308486127 240 VFNCE-------------SLki-reGDWVETNDLMGAsCK--KIYvdgmeM-SM--EE--AVRIVKDWRtGGG-FRNLES 297
gi 453231898 195 SFQCDiaikqq--elcvcN------AEWFTLDSLLKAdCS--RIFldgseL-TS--IE--LNRFLRSWL-LSEsNRNLKS 258

                 ...
gi 75015234  274 LSI 276
gi 341886061 194 FQI 196
gi 341895643 255 LRM 257
gi 341880821 253 ISL 255
gi 341885636 202 FVV 204
gi 268553063 180 FQA 182
gi 341897418 274 CKI 276
gi 308478830 250 FSI 252
gi 308486127 298 MEI 300
gi 453231898 259 FEI 261
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap