Conserved Protein Domain Family
HCNGP

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pfam07818: HCNGP 
HCNGP-like protein
This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP. This protein is localized to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.
Statistics
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PSSM-Id: 311665
View PSSM: pfam07818
Aligned: 95 rows
Threshold Bit Score: 80.6437
Threshold Setting Gi: 74862547
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74856171  193 IPEAPKdSqvD----FGLKEKIIRYH-KMKQ-D-GISINQALRNSSSFKNPSVIEKLISFCEI--------------DE- 250
gi 74880461  166 IFYLPE-NkyS----EILNKKIDE-LsKLYE-I-NLTINKNIINSNEYKNPGILEKIMEMFDI---------------Dv 222
gi 74862547  138 IFNISE-NeyS----DILNTKIEE-LsKLYE-L-NLTINKNIINSNEYKNPCILEKIMEIFQI---------------Dv 194
gi 296413678 121 tsipeippsppgeehPDVSSKFKRFR-ELKR-Q-GIHFNEQLSRSSTLQNPNLFEKLTEFVGVtg-----------gDQ- 185
gi 171684675  37 ippspplsptllpqiNSLTAKFDNFL-KLKReK-NIHFNERIAQSHGLRNPAVMEQLLTFAGIgtsfdgdddggrgtEQ- 113
gi 667833870 142 radftipdsppdtpppstaSKFGHFL-ALKA-A-GTHFNARIASTPSLRNPSLLAKLLDFAGI--------------SQe 204
gi 901893430 198 VFFLPP-NeyS----DCLNQKIEE-LsKLYE-I-NLTINKNIINSNEYKNPCILEKIMQIFQI---------------Dv 254
gi 530478982 124 IPPSPPgS--Pp---PALTAKFTQFI-ELKK-K-GVHFNAKLAQSSALRNPSLTDKLMDFVDIdg-----------rGG- 183
gi 549046281 121 LPPSPPgS--Pk---AAIAGKFGHFR-SLKY-Q-GVHFNEKLLRTQSLRNPNILQKLMGFVGFdd-----------lDQ- 180
gi 930137122 150 IPGSPPgT--PppglETLSSKFDTFL-ALKR-DkATHFNARLAQSGAMKNPAVMDKLMAFVGLdgt---------gpAQ- 215
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 74856171  251 --LGSNYPLSQFN-P-----HS--YPLDDYYKPLNEKQRKMDEK 284
gi 74880461  223 --YSSNYPPHIYN-P-----HD------FLSVDLFNEKENTTDK 252
gi 74862547  195 --YSSNYPLHIYN-P-----KF------FSSLDLFNERSQENIQ 224
gi 296413678 186 --YTSCLPKEFWD-P-----FG--FPEEAFADKLAKRQIEVLEK 219
gi 171684675 114 --YATTLSKELWD-Pl----TG--FPGWAYKDALWKTQIKTRKE 148
gi 667833870 205 esYASTLGEDSGGvP-----AI--YPPEAYADSLQGSQSAITAQ 241
gi 901893430 255 --YSSNYPLNIYN-P-----HD------FLSIDLFNEKGEETDQ 284
gi 530478982 184 --YATTLPHDIWD-Pt----SEaaFPEWATRTALRQSQERVRAE 220
gi 549046281 181 --YATNMAPELWD-P-----KG--FKKEAFADELLVSHQKIADA 214
gi 930137122 216 --YGTVLPAEVWN-PdaedrTApvFPDWAYRHPLRKVQEELGRQ 256
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