Conserved Protein Domain Family
Alpha-amyl_C2

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pfam07821: Alpha-amyl_C2 
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Alpha-amylase C-terminal beta-sheet domain
This domain is organised as a five-stranded anti-parallel beta-sheet. It is the probable result of a decay of the common-fold.
Statistics
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PSSM-Id: 311667
View PSSM: pfam07821
Aligned: 85 rows
Threshold Bit Score: 54.0446
Threshold Setting Gi: 524740149
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
1AVA_A       343 RHGIHNESKLQIIEADADLYLAEI---DGKVIVKLGPRyDvgnLIPg-------G-----F-K---VAAHGNDYAVWE 401
gi 168000555 345 RNDLHSRSRVEILEANNDVYAAMI---DQKVCMKLGDG-D---WCPrl-----gD-----W-E---LATSGKSYAIWQ 401
gi 504438145 379 ekGITSTSSIDVLAADSGKYVARI---DDVLIVKIGPDlS---YNPs------sE-----W-T---LTAYGNDWAVWT 435
gi 302813274 336 RTGINCRSPVKIFHANNDGYVAKV---GEQLVVKLG-RfD---WNPskqndligN-----W-Kr--SVGQGSDYQVWE 398
gi 565395605 910 RAGIHCRSPLKIYHANGDGYVAQI---GDTLVMKLGHl-D---WNPskevhldgT-----WqK---FVDKGPEYQIWl 972
gi 168067856 339 kleVHSRSHITILEADTNGYSAVV---DNKLCVRLGNt-E---WTPps-----dSl----W-E---LTLSGSGYMIWs 396
gi 168031386 328 RTGVHCRSKVKIFQANFEGYAAQV---GDNLVMKIGHl-D---WNPsk-----qNnlagsWnR---CTDKG-EYQLWE 389
gi 511625220 359 aCGVSNTSKVDVIKSETGCYVAKIygsKGTLGVRIGWTtD---YDNtf-----sS-----F-T---KVASGTQYSMWM 419
gi 524740149 365 SVGLTNQCTVNVLETTNNRYVAEVtgnNGKLLIKIGRG-S---YDPsa-----kG-----Y-StsdKVAGNALYSIWT 427
gi 586671187 913 RAGIHCRSSVKIYHANNEGYVAQI---GDTLLMKIGHL-D---WNPskenqlegS-----WqK---FVDKGGDYQLWl 975
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