1AVA


Conserved Protein Domain Family
Alpha-amyl_C2

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pfam07821: Alpha-amyl_C2 
Click on image for an interactive view with Cn3D
Alpha-amylase C-terminal beta-sheet domain
This domain is organized as a five-stranded anti-parallel beta-sheet. It is the probable result of a decay of the common-fold.
Statistics
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PSSM-Id: 336826
View PSSM: pfam07821
Aligned: 82 rows
Threshold Bit Score: 53.661
Threshold Setting Gi: 524740149
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
1AVA_A       343 RHGIHNESKLQIIEADADLYLAEI---DGKVIVKLGPRyDvgnLIPg-------G-----F-K-VAAHGNDYAVWE 401
gi 168000555 345 RNDLHSRSRVEILEANNDVYAAMI---DQKVCMKLGDG-D---WCPrl-----gD-----W-E-LATSGKSYAIWQ 401
gi 504438145 379 ekGITSTSSIDVLAADSGKYVARI---DDVLIVKIGPDlS---YNPs------sE-----W-T-LTAYGNDWAVWT 435
gi 302813274 336 RTGINCRSPVKIFHANNDGYVAKV---GEQLVVKLG-RfD---WNPskqndligN-----W-KrSVGQGSDYQVWE 398
gi 565395605 910 RAGIHCRSPLKIYHANGDGYVAQI---GDTLVMKLGHl-D---WNPskevhldgT-----WqK-FVDKGPEYQIWl 972
gi 168067856 339 kleVHSRSHITILEADTNGYSAVV---DNKLCVRLGNt-E---WTPps-----dSl----W-E-LTLSGSGYMIWs 396
gi 168031386 328 RTGVHCRSKVKIFQANFEGYAAQV---GDNLVMKIGHl-D---WNPsk-----qNnlagsWnR-CTDKG-EYQLWE 389
gi 511625220 359 aCGVSNTSKVDVIKSETGCYVAKIygsKGTLGVRIGWTtD---YDNtf-----sS-----F-T-KVASGTQYSMWM 419
gi 524740149 365 SVGLTNQCTVNVLETTNNRYVAEVtgnNGKLLIKIGRG-S---YDPsak--gysT-----S-D-KVAGNALYSIWT 427
gi 586671187 913 RAGIHCRSSVKIYHANNEGYVAQI---GDTLLMKIGHL-D---WNPskenqlegS-----WqK-FVDKGGDYQLWl 975
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