Conserved Protein Domain Family
Dabb

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pfam07876: Dabb 
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Stress responsive A/B Barrel Domain
The function of this family is unknown, but it is upregulated in response to salt stress in Populus balsamifera. It is also found at the C-terminus of an fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus. Arthrobacter nicotinovorans ORF106 is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an a/b barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.
Statistics
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PSSM-Id: 311705
View PSSM: pfam07876
Aligned: 40 rows
Threshold Bit Score: 46.5408
Threshold Setting Gi: 75131480
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3BDE_B        21 IRHTVVFTLKHASHSLEEKRF----LVDAKKI-------LSAIRGVTHFEQLRQISPKI---DYHFGFSXEFADQAAYTR 86
gi 74618286   10 IHRMTLFKIPDETNQKRLLDAyhvvAEEQKKLas----qKDGKPYILQLTAGKTLPDQKa-rGYTVASYIEFASMDDMRY 84
gi 81779771    2 IRHCVFVRFRGDVPESERAAI----HADLEAL-------RQVIDGMDTVHFSANVSPEPfarGFSHGFTIDFRDAAARDA 70
gi 81661327   33 LRHVVMFGFKDASSEADVQKV----VDAFRNL-------PNEIPEIADFEYGTNNSPEGlndGLTHCFLVTFSSEKDREA 101
gi 74615254   57 ITHIVLFKFKPDAGADRIKTI----SNRFLGLkeq-cvtMTQQPYIRKISGGRDNSPEGlqgGLTHAFVVEFESAAERDY 131
gi 74615515    3 IVHVELFEFKPLATQEEVQQV----CDKMMSLkdrcihpKTHMPYLKTAIGGADVCPEGlrgRISHVFVSEFDTPEDRKF 78
gi 75131480  154 AVRLSLAKLKEGVEAHQLAEK----LAAATAA-------AGEAKG-AKVSFGENFSPARa-kGYQFGMVAVFDSVEGLDA 220
gi 75213414  116 IGKITLLKLKENVMEEAK-------LEIMEVM-------KEKFEGIDQITVGENFSPGRs-kDFSIGSISYFRDLGEIEA 180
gi 9931349    42 LQHIVLFRFKKNVTEAERREV----TKQFLELakt-skrPDGQSVIVSIETGSQNSGENagmDMDQGYIVTFNSEGDRNY 116
gi 493353177   2 ILHCVFLRFKAATASSEKHAV----FEAIAAL-------KDEIPGIVDVKYGQNISPEGlngGFVDGFIVTLESPEARDG 70
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
3BDE_B        87 YND-HP----------DHVAFVrDRWVPEVE----KFLEIDYVP 115
gi 74618286   85 YDN-EC----------LAHAMLkEIGPSLNLseppTILCFEKSN 117
gi 81779771   71 YLV-HE----------AHQRAG-ARLVAALEggtdGLMVFDLDL 102
gi 81661327  102 YLP-HP----------AHKAFV-EVLKPHLE----KVVVIDYWA 129
gi 74615254  132 YVNlDP----------VHQSFK-KDIEPFVE----KVTVVDFTN 160
gi 74615515   79 YLEeDP----------AFREAV-ESIEGIVE----RRQVVEFSP 107
gi 75131480  221 VDG-DG----------KV-EAAkAIVRPLLD----DVLELEFVV 248
gi 75213414  181 VDD--------------QMKLQnDKIRDYVD----DTIVVEFNV 206
gi 9931349   117 YVG-RPlvndpaffdaAHEQFK-SFAGTFLE----KAIVFDFKV 154
gi 493353177  71 YLA-HP----------QHVEVG-ERLVSLTDgglaGLLVFDMNV 102
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