Conserved Protein Domain Family
Ion_trans_2

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pfam07885: Ion_trans_2 
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Ion channel
This family includes the two membrane helix type ion channels found in bacteria.
Statistics
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PSSM-Id: 311712
View PSSM: pfam07885
Aligned: 105 rows
Threshold Bit Score: 29.505
Threshold Setting Gi: 81787628
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4TWK_A      194 GCVLFVALPAIIFKHIeg-----------------wSALD-AIYFVVITLTTIGFGDYVAGgSDIeyldfyKPVV-WFWI 254
gi 81555998  70 VIWISLFWSGWVLIYSsdphslme-----tqskepaSWSD-RIYFSGYVMFTLGNGDLAPNgGLW------KLVT-IIET 136
gi 74569129 494 TVALIVLSFGGLYYWFdliqpdltaq-apteslppvSLFD-AMYFSTMTFTTLGYGDFRPA-SQIg-----QILA-ISET 564
gi 81580808  43 IYTTVLIAFGLSYVVLeemgfavlkedgeslnahsfQLVEvCLYFSAVTLLSVGYGDISPI-GIG------RWIA-IAEA 114
gi 81741266  53 VYITIMLGYGMIYFILslegivlvehgelrqvsiigSLIH-SVYFSGVTLLTIGYGDIIPI-GIG------RLIA-VSEA 123
gi 81787628  47 VYTTVILAFAVVYLSLslqgfqviqavdfrsmasvwDIIEtTVYFSGVTLLTVGYGDYVPI-GIG------RYVA-LLQA 118
gi 81749973  43 YALLLTLVVTLIVYFDrggy------------seelTFID-ALYYSTVSLTTVGYGDITPVtQEA------RLLNvLVIT 103
gi 81761272  24 YAMVLLVIVTMVVYFDrngy------------sedlTFID-ALYYSTVSLTTVGYGDITPVtQSA------RLINiIVLT 84
gi 81669335  46 VAVVALLLTAGIVYVDrdgyld--------aqgdrlTFLD-CLYYAAVTLSTTGYGDITPIsEFA------RAINiFVIT 110
gi 81554239  42 IALLVLVVTAVIVYADhdgytd--------nsdgsvDLLD-SFYYATVTLSTTGYGDITPVsDAA------RLTNiFVIT 106
                        90       100
                ....*....|....*....|
4TWK_A      255 LVGLAYFAAVLSMIGDWLRV 274
gi 81555998 137 AQGLLTITFSVTYLISVLSA 156
gi 74569129 565 SAGVVLLALLVFVFGRRATR 584
gi 81580808 115 LIGYTLPFAFV--MRSVIDN 132
gi 81741266 124 LIGYILPAAFVLKVVQIGSR 143
gi 81787628 119 LLGYLLPAAFV--VSTVMMR 136
gi 81749973 104 PFRIAFLVLLVGTTLSVLTE 123
gi 81761272  85 PARIGFLILLVGTTLSVLTE 104
gi 81669335 111 PLRIAFLILLVGTTLEVLTE 130
gi 81554239 107 PLRVLFLIILVGTTLEALTE 126
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