3VOU


Conserved Protein Domain Family
Ion_trans_2

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pfam07885: Ion_trans_2 
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Ion channel
This family includes the two membrane helix type ion channels found in bacteria.
Statistics
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PSSM-Id: 336849
View PSSM: pfam07885
Aligned: 104 rows
Threshold Bit Score: 30.2958
Threshold Setting Gi: 81787628
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3VOU_A       32 VLTFLTLTSGTIFYS------------T-VeglRPLD-ALYFSVVTLTTVGDGNFSPQ-TDFgKVFT-ILYIFIGIGLVF 95
gi 75015848 132 EIFDLLYASNPPKHIe-----------------EFLD-GLAYVITCITTIGYGELVCH-TIAgKLVT-VAYGIIGIALTL 191
gi 74965084 101 EMVRFISDGATSGLLns--------rsR-F---DHLG-SLFFSATVISTIGFGTSTPR-THLgRFIT-IVYGVVGCTCCV 165
gi 74965422 110 MLEDAHNAHAFEYFFlnhe----ipkdM-W---TFSS-ALVFTTTTVIPVGYGYIFPV-SAYgRMCL-IAYALLGIPLTL 178
gi 74959590 291 LMKLEGQYKGSTYYKlea-------ddN-Wk-wTFES-AFFFSMNVYTTTGYGSIAPE-STLgQVLV-CVYGFIFVPVTL 358
gi 74965964 260 RVSETVDDRRPIRRElnrpdd-lsnmhNkW---TFPT-AILYVLTVLTTCGYGEVSVD-TDVgKVFS-VAFALVGIPLMF 332
gi 74960817 150 SLSRAHEYDDKFTDTnqlwtgeqdgmtTrW---TFAA-ATLYALTVITSTGYDHVTPA-TDPgRIFT-VFFGLIGIPLMF 223
gi 75018745 112 AAAIAERCLTENVKDd-------------RmqwSFKS-AALYSLGILTTLGYGKIEPQtING--RIStVIYGFFGIPLTV 175
gi 74963866  88 ITAEMKSKLGKCLTKs-------------SridGFGK-AIFFSWTLYSTVGYGSLYPHsTLG-RYLT-IFYSLLMIPVFI 151
gi 74963992  76 VALILYVLFGCQVFDlr--------hsStNneaSFLDrALFC-ITTISTIGYGNIAPF-DDRgKVIC-ILYCVAGIPLFF 144

                ....*..
3VOU_A       96 GFIHKLA 102
gi 75015848 192 YVLRNNG 198
gi 74965084 166 LFFNLFL 172
gi 74965422 179 VTMADTG 185
gi 74959590 359 VVLRDLG 365
gi 74965964 333 ITAADIG 339
gi 74960817 224 ITAADIG 230
gi 75018745 176 ILLTNFG 182
gi 74963866 152 AFKFEFG 158
gi 74963992 145 MTVATNS 151
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