Conserved Protein Domain Family
Rrp15p

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pfam07890: Rrp15p 
Rrp15p
Rrp15p is required for the formation of 60S ribosomal subunits.
Statistics
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PSSM-Id: 311717
View PSSM: pfam07890
Aligned: 154 rows
Threshold Bit Score: 49.5269
Threshold Setting Gi: 122017311
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121781002  163 SKLPASRRAD-PIVAR-SAAAAEQSRqa------------------------------------vDAALEAKARKRLREQ 204
gi 765548734  256 KQVSATEA---PILSK-SKAIERNIA---------------------------------------KAQQEEREMRVKAAE 292
gi 156405499   51 KPLTDNKPV---ILSK-YQKGSKRKA---------------------------------------EHREEMKKKKAKAQE 87
gi 470266133  115 KEPAIVKSGGaPILSKyKKKKTEDEA---------------------------------------DQEETKKKQKKKRQE 155
gi 330844846   68 SNKKIESHSApILLKS-QQTLNQQIQ---------------------------------------KEKEKKKAQKEKELE 107
gi 219113403  130 GSSKTTLGAKpVVLAK-TTTPLQRQAa--------------------------------------REKESVKAAQEKRRA 170
gi 397638754  156 gGFSEKRDPKsVILSK-TTTPLQRLQqk-----------------------------------ikSEEQELKQKRQNRRE 199
gi 298706426  161 QKLDTRVQAP--VLAK-------------------------------------------------RKTKTMKEMENASVK 189
gi 301104739    7 QNVAEDALP---ILAK-RTTARMREIq--------------------------------------SDKKETKTARLSAAE 44
gi 358339982   16 ETIPLGKH---PILAL-AKTDQEKQKakgclqvtddenssvvstaerrrwlreaykkpqaaagirQTILTLNNPPSEQSG 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121781002  205 -----------------------------KRL----------AMEKGRVR--DVLVA-------Startlnvatgeieev 236
gi 765548734  293 -----------------------------RKE----------LANKDRVIptla-------------------------- 307
gi 156405499   88 -----------------------------KHA----------ILEKDHIIpdks-------------------------- 102
gi 470266133  156 -----------------------------KDM----------VESVSHKKidVLITSe---------------------- 174
gi 330844846  108 -----------------------------KEL----------LKNKDYKPieILLTPe---------------------- 126
gi 219113403  171 n----------------------------RERtlqachvplsVATTSHVDdsNNAGAalvqeleQ--------------- 207
gi 397638754  200 qnlscmrvplaptagmsaeklwkqhakksKRKrgdgpevqeeYQSKNAVAiaNEIES----------------------- 256
gi 298706426  190 -----------------------------RAE----------TRGKSAARraNMTQQfvipdhtTtd------------- 217
gi 301104739   45 -----------------------------KRE----------REQKDMAVpdHTTAVq---------------------- 63
gi 358339982   92 -----------------------------TKE----------EVEWEHAR------------------------------ 102
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121781002  237 pdvapgeaattgeilaaEKRLRKVAQRGVVKLFNAVRAAQVKATEAERAA-RKEGvv--------gvDRKQEKVTEMSRK 307
gi 765548734  308 -------------tlehERQLVRIATKGVVKLFNAVSQQQKQAETGPASTt----------------KKAQVEASTLTKQ 358
gi 156405499  103 -------------nldyDRNLVKIATRGVVKLFNAVSKHQKEMDTKLSKAtTE--------------TKKTKVMESLTKS 155
gi 470266133  175 -----------------EREKMRVAKRGVIKLFNAVAKHQ--LENPVVDAdLDDEi----------dPQKDE----MTKN 221
gi 330844846  127 -----------------ERDLLRLAKKGVIKLFNAVTQHQSSGMTASVDSkSKN----------------------ISKN 167
gi 219113403  208 -----------------ERSHRRVATRGVVALFNAIAQHQHQVVEPEAPSsQI--------------SNKKDSVKKLTKH 256
gi 397638754  257 -----------------ERTHRRIATRGVVALFNAISKHRAAVAAEAAAKeEEKRrlreegalirkkKEEEKAAVSTSKF 319
gi 298706426  218 ----------------yERQLKKIATRGVVALFNAISKRQNQGGASAGGAgGGSSgns------vaaAAKATVVKGASRH 275
gi 301104739   64 -----------------DRKLRMIATKGVVALFNAIEKHQHQGGKK-E-------------------DKNDKKVKEMSKD 106
gi 358339982  103 -----------------ERRLRLQATRGIVALFNSVRQHQSSISSQLDNSdLLE-------------TQKERILTEITTS 152

                  ....*..
gi 121781002  308 GFLDLIA 314
gi 765548734  359 TFFDMLK 365
gi 156405499  156 SFLDMLK 162
gi 470266133  222 QFLSKLK 228
gi 330844846  168 QFLETLK 174
gi 219113403  257 GFLDMIK 263
gi 397638754  320 GFLDMIK 326
gi 298706426  276 AFLDMLK 282
gi 301104739  107 NFLGLLK 113
gi 358339982  153 DFLDRLs 159
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