Conserved Protein Domain Family
PROCT

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pfam08084: PROCT 
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PROCT (NUC072) domain
The PROCT domain is the C-terminal domain in pre-mRNA splicing factors of PRO8 family.
Statistics
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PSSM-Id: 311847
View PSSM: pfam08084
Aligned: 100 rows
Threshold Bit Score: 127.276
Threshold Setting Gi: 67475030
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3JB9_A       2239 VTLTVSYIPGSISLAAYTVSKEGIEWGSKnMDInS--DE--AIGYEPSMAEKCQLLLSDRIQGFFLVPEEGVWNYNFNGA 2314
gi 74604503  2234 LCMVVSFAPGSVSISPYALTKEGLAWGAQnTDLvS--DQ--PAGYSTAFGAPRQLLLTDKLCGFFVVPETDVWNHTFMGT 2309
gi 122100756 2276 TTVVVGVSQDGIGIRCYTTTREGISWALE-EYShAlqRE--PTEVPPLHVIPARVTLSTELQGFFLVPTDNGWNHTFRGA 2352
gi 598065359 2266 IDMTVAFTPGSITISAFELNELGYEWGKQnQDMiSe--S--PQGFSKDFSKQGQLIVTDQIGGTFMVPEDEIWNYFFIGT 2341
gi 448121520 2349 ITIKTALTPGSITLSSYFLNEEGYEWGSQnSDLiSq--Q--PKGYSTSFSIKGQILLSDRISGSTLVPEDDIWNYTFMGA 2424
gi 254572423 2304 VTLVAAFTPGSISLSAYSLTSEGLDWGLKnQDTvSi--N--PQGYMPQFGEKSSVLLTDRIKGFFLVPSTNLWNFAFNGN 2379
gi 927372991 2271 sVINVAFTPGSVTLSSVSLTPEGYKWGQThLDAlGs--MlvAPGYSEEFRKKTPLILTDKLKGYFLVPDIDTWNYSFIAN 2348
gi 4757577   2197 anVVISFPVGGCIMAASTLSREGFEWAETn--IgMd--N--PKDFDDNFAKVLGISITNEINGWMMAPENGIWNYSFNSL 2270
gi 407847508 2181 VTAVMGISQDGLNMRCYTTTREGISWALE-NYAkAleRE--PTEVAPKHFAPCRATLSEDLQGFFLVPTGGDWNYAFKGA 2257
gi 731708162 2297 LTAVLEMSEEGVIVRCYSTTADGIAWAQV-EYErLlkKT--PEATDPVFSSPCRGTLSSEVRSFFLVPVERVWNYYFKGA 2373
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
3JB9_A       2315 SF-SPKMTYSLKLDVPLPFFALEHRPTHVISYTELet--nDRLEEDMPDA 2361
gi 74604503  2310 AW-NENDDYDLKLDIPLAFYHELHRPLHFTGFSNM--------EEGERLG 2350
gi 122100756 2353 TW-REDTTFDVRVDTPQFFFFATHRPDHFLNFARLteeeaTIDMADLENL 2401
gi 598065359 2342 MF-NPKEIYDMKVDIPIGFYHELHRPIHFLGFSQLqe--dNIAEADQEDV 2388
gi 448121520 2425 VW-DSEVPVKLKVDIPLTFYNDLHRPVHFSNFNDIeg--sN-LEADQEDN 2470
gi 254572423 2380 AW-TSSMEYTLKLDTPLPFYHELHRPIHFIEFTNIee---dYLDIKTDDV 2425
gi 927372991 2349 AW-TEDFEFDLKLDNPIPFYHELHRPLHFTLFDRt----eTALEAGQENV 2393
gi 4757577   2271 RLqSVPDNYPISVQNPKTFFDMYHRVQHFTSFKREmn--gEELSIDVDNN 2318
gi 407847508 2258 TW-RESTEFDVRADIPVFFFAAHHRPDHFLNFARLseeeeTIDMADMDDT 2306
gi 731708162 2374 LW-RENTEYDVVVDLPLHFFDALHRPDHFLNFTRMgddaeVMDEADPNDV 2422
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