2P87,3JB9


Conserved Protein Domain Family
PROCT

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pfam08084: PROCT 
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PROCT (NUC072) domain
The PROCT domain is the C-terminal domain in pre-mRNA splicing factors of PRO8 family.
Statistics
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PSSM-Id: 336922
View PSSM: pfam08084
Aligned: 100 rows
Threshold Bit Score: 128.048
Threshold Setting Gi: 67475030
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2P87_A        149 VMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKg---NN--PKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQ 223
gi 122100756 2276 TTVVVGVSQDGIGIRCYTTTREGISWALE-EYShalqRE--PTEVPPLHVIPARVTLSTELQGFFLVPTDNGWNHTFRGA 2352
gi 74604503  2234 LCMVVSFAPGSVSISPYALTKEGLAWGAQNTDLv--sDQ--PAGYSTAFGAPRQLLLTDKLCGFFVVPETDVWNHTFMGT 2309
gi 354546183 2297 IDMTASYTPGSVTLAAFELSERGFEWGKSNKDMm--sDS--PEGFEKSFSKKSQLIMSDKILGTYMVPEDEIWNYFFMGA 2372
gi 598065359 2266 IDMTVAFTPGSITISAFELNELGYEWGKQNQDMi--sES--PQGFSKDFSKQGQLIVTDQIGGTFMVPEDEIWNYFFIGT 2341
gi 358349765 2349 ITIKTALTPGSITLSSYFLNEEGYEWGSQNSDLi--sQQ--PKGYSTSFSIKGQILLSDRISGSTLVPEDDIWNYTFMGA 2424
gi 254572423 2304 VTLVAAFTPGSISLSAYSLTSEGLDWGLKNQDTv--sIN--PQGYMPQFGEKSSVLLTDRIKGFFLVPSTNLWNFAFNGN 2379
gi 927372991 2271 sVINVAFTPGSVTLSSVSLTPEGYKWGQTHLDAl--gSMlvAPGYSEEFRKKTPLILTDKLKGYFLVPDIDTWNYSFIAN 2348
gi 4757577   2197 anVVISFPVGGCIMAASTLSREGFEWAETN--Ig--mDN--PKDFDDNFAKVLGISITNEINGWMMAPENGIWNYSFNSL 2270
gi 731708162 2297 LTAVLEMSEEGVIVRCYSTTADGIAWAQV-EYErllkKT--PEATDPVFSSPCRGTLSSEVRSFFLVPVERVWNYYFKGA 2373
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
2P87_A        224 RW-SPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFdd-plGTGSADREDA 271
gi 122100756 2353 TW-REDTTFDVRVDTPQFFFFATHRPDHFLNFARLteeeaTIDMADLENL 2401
gi 74604503  2310 AW-NENDDYDLKLDIPLAFYHELHRPLHFTGFSNM--------EEGERLG 2350
gi 354546183 2373 IF-NSNDLYNLKVDIPLSFYDAVHRPIHFTNFAQLea--gNEEEAYQEDV 2419
gi 598065359 2342 MF-NPKEIYDMKVDIPIGFYHELHRPIHFLGFSQLqe--dNIAEADQEDV 2388
gi 358349765 2425 VW-DSEVPVKLKVDIPLTFYNDLHRPVHFSNFNDIeg--sN-LEADQEDN 2470
gi 254572423 2380 AW-TSSMEYTLKLDTPLPFYHELHRPIHFIEFTNIeedyldiktddvfs- 2427
gi 927372991 2349 AW-TEDFEFDLKLDNPIPFYHELHRPLHFTLFDRTe----TALEAGQENV 2393
gi 4757577   2271 RLqSVPDNYPISVQNPKTFFDMYHRVQHFTSFKREmn--gEELSIDVDNN 2318
gi 731708162 2374 LW-RENTEYDVVVDLPLHFFDALHRPDHFLNFTRMgddaeVMDEADPNDV 2422
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