Conserved Protein Domain Family
CBFNT

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pfam08143: CBFNT 
CBFNT (NUC161) domain
This N terminal domain is found in proteins of CARG-binding factor A-like proteins.
Statistics
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PSSM-Id: 311868
View PSSM: pfam08143
Aligned: 15 rows
Threshold Bit Score: 38.6849
Threshold Setting Gi: 33516945
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75069350    1 MS---EEQFGGDgaaAAataavGG--SAGEQEGAMVAPAQGAAAaagsgagtg-------------ggtasggtEGGSAE 62
gi 82241336    1 MSd-aEQQYMET---SL-----NGheGEDDLNGAGQYDQGNGDAqagaqg------------------nagadgTAGDDG 53
gi 123915281   1 MAd-aDNLLMETs--EQ-----NGneGEEEQNGAELEQMAGD--------------------------------EEQDNN 40
gi 82267614    1 MAd-aETLLMETm--DQ-----NGneEEGGQDEAEQELMMGE--------------------------------EDQGDD 40
gi 82241616    1 MSd-tEQQCLETn--AE-----NGheACDAEAAEDKA-------------------------------------PAGQNG 35
gi 74727276    1 MSeagEEQPMETtgaTE-----NGheAVPEGESPA----GAGTGaaagagg-----------------ataappSGNQNG 54
gi 81908454    1 MSdaaEEQPMETtgaTE-----NGheAAPEGEAPVEPSPGSGPAtpagsvg-----------------gttaapSGNQNG 58
gi 82245322    1 MSe-aEQQLAAAagaTQ-----NGheAAESSGEQQQADTGGAPAasagaataaaatagtaaaagagpaagtagvAASQNG 74
gi 81917940   28 EAgevEAVFRCSsseLP-----Nw--SCDYRLKVPNQKKNGGRGs----------------------------rPSGNQN 72
gi 82259609    7 FS---DDAIMTRm--EE-----DGeaNCDDPMSATLGDC-----------------------------------GPMGDE 41
                         90
                 ....*....|....*.
gi 75069350   63 SEGAKIDASKNEEDEG 78
gi 82241336   54 ADGGQIDASKGEEDAG 69
gi 123915281  41 TDGGKIDASKGEEDAG 56
gi 82267614   41 ADGGKIEATKGDEDTG 56
gi 82241616   36 AEGEQINASKGEEDAG 51
gi 74727276   55 AEGDQINASKNEEDAG 70
gi 81908454   59 AEGDQINASKNEEDAG 74
gi 82245322   75 AEGDQINASKNEEDAG 90
gi 81917940   73 GEGDQINASKNEEDAG 88
gi 82259609   42 ADGSRIDASKNEEDEG 57
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