Conserved Protein Domain Family
BP28CT

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pfam08146: BP28CT 
BP28CT (NUC211) domain
This C terminal domain is found in BAP28-like nucleolar proteins.
Statistics
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PSSM-Id: 311871
View PSSM: pfam08146
Aligned: 148 rows
Threshold Bit Score: 97.2248
Threshold Setting Gi: 118374577
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124476560 1486 EQLMQLNKEVQSIFDYS---REQYID----SElkngiF----------------------------E------ADK---- 1520
gi 302759805 1700 AYHTKVFDLCKEALDLR---RKRPES----FV-----S----------------------------R------H-T---- 1728
gi 970017442 1837 AYHVRIFDVCLQGLDLR---RQHPAA----V------K----------------------------N------VDA---- 1865
gi 302849752 1996 QNSESMFAFLLSALDVR---QRHPKAlgvhGD-----F----------------------------A------INT---- 2029
gi 470293069 2208 AQIKPLSRFFLTAFNWR---ALVQPA----TS-----A----------------------------DavahhqLVI---- 2243
gi 298705754 2422 AALPQLTRLLTQALDFR---RQHASG----ST-----P----------------------------Q------VREsaal 2455
gi 301123185 1746 KHLPSFARFFVTALDAR---RVHASK----L------Q----------------------------D------VEE---- 1774
gi 514692958 2076 RQAAHLFRFFATALQFRsqrRMHQVQ----AS-----KkagadgddssdeegededeeesegevreA------IVL---- 2136
gi 297829192 1607 SNHGKIFDQCLVALDIR---RQNPAA----I------Q----------------------------N------IDE---- 1635
gi 685313151 1903 CNHAKIFDQCLAALDIR---RQNPAT----I------Q----------------------------N------VDD---- 1931
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124476560 1521 LEYQINQVYIEIVMKINDVSFKKLYSNLIAW-Srk-----qI-----QEVGYN---FNKYRRIQFFRLSTQTSDKLGKYF 1586
gi 302759805 1729 VEESVISAVTSLVMKLSETTFRPLFVTIQQW-Aa-------S-----PVADGS---QSIERSIVFYKLVNQLAEKLRSVF 1792
gi 970017442 1866 VEKNVINTVVALTMKLTEKMFKPLFMRSIEW-Sesi---veE-----NENVGT---KSIDRSIAFYGLVNSLADSQRSLF 1933
gi 302849752 2030 VEDAAISAVVALVMKLSEVRFKPLFLRLLEW-Ast-----vTvseapGAGGEP---SYLGRMVAMFGVVNALADRLRSVL 2100
gi 470293069 2244 AEDSLIQAFASLALKLSESQFRPVLVQVVEW-Al------vT-----PAAVTL---AVVARRITLYRLMTALSERLRNLF 2308
gi 298705754 2456 VETEASSALVGLVMRLSEVELRPLFLHLCEWkAgv-----sS-----GEGDLKatlGALDRRLSFYRVLDGLAGALKSIF 2525
gi 301123185 1775 VEEQVLECLVQFVLKLSEKQLKPLFLKLAEW-Aqt-----rV-----GSCGKA---GDIARRISFSKLVVKLSERLRGIF 1840
gi 514692958 2137 VEGSAISCVCAMVLHMSDQSFRPYFVRLVDW-AsasvtsatP-----SSSSSA---STASRVVTLARLVQELASRLRHVF 2207
gi 297829192 1636 AERSVTNAMVALTKKLTESEFRPLFIRSIDW-Aesd---ivD-----GSGSEN---KNIDRAISFYGLVNRLCESHRSIF 1703
gi 685313151 1932 AERSVINATVTLTKKLTESEFKPLFIRSIDW-Aese---ivD-----GSGNES---KSVDRSISFYGLVNRLCKAHTSIF 1999
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124476560 1587 TKYYSYIWDAI------VNE-------------------L---------------------------------------- 1601
gi 302759805 1793 VPYFRYLVDGC------LAV-------------------Laksgetrks---------------------------kkrk 1820
gi 970017442 1934 VPNFKHLLDGC------VRHlmdaegaestlkhkkkkvkL---------------------------------------- 1967
gi 302849752 2101 VPYYRYLLDLC------VQH-------------------L---------------------------------------- 2115
gi 470293069 2309 TPFFGLVWTDL------VKV-------------------L---------------------------------------- 2323
gi 298705754 2526 TPYFAHVLTDCcddmeaASL-------------------L---------------------------------------- 2546
gi 301123185 1841 VPYYAHVLEFF------TSA-------------------Lgesrkvlmhkpprstedsdsddddffadedeppvkkaklg 1895
gi 514692958 2208 VSYFSTLLRTF------VQF-------------------L---------------------------------------- 2222
gi 297829192 1704 VPYFKYVLDGI------VSH-------------------Ltsaeasvstrkkkka------------------------- 1733
gi 685313151 2000 VPYFKFMLDGI------VSH-------------------Ltsaagasvstrkkkka------------------------ 2030
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124476560 1602 ----QTFhnifyetpkqtklqk--------------------------rtndecdmyyrlellLN-------RHILQSIS 1644
gi 302759805 1821 tvsvSADsgsal-----------------------------------------------akwhLK-------HLVVSSLH 1846
gi 970017442 1968 ----QESnskkkdtnc---------------------------------------glsiglwhLR-------ALILSSLH 1997
gi 302849752 2116 ----GGAdgmdgkgarskkkprrsaa------------------asvdaaasyndqqvclawlLR-------LRIIRALH 2166
gi 470293069 2324 ----DNQlfasqelr-----------------------------------------sdraaseLL-------DAALVALH 2351
gi 298705754 2547 ----TSVaangspaaakkkkrkraseeasskrkrrktlssgdasdsdeeigegndgegedtpeLRwrrsaasRLVLSALR 2622
gi 301123185 1896 asatTDVkaere-----------------------------------------------rntlLL-------TTVVRALD 1921
gi 514692958 2223 ----TNQgkcltrl-------------------------------------------gpdgpdMV-------KYVCGALS 2248
gi 297829192 1734 ------------------------------------------------kiqetsdsispkswhLR-------ALVISSLK 1758
gi 685313151 2031 ------------------------------------------------kiqetddtlppkswhLR-------ALGLSCLN 2055
                         330
                  ....*....|
gi 124476560 1645 SLCQNDCEQF 1654
gi 302759805 1847 KCFLYDSVGF 1856
gi 970017442 1998 KSFLYDTGtl 2007
gi 302849752 2167 RCFNHDSVGF 2176
gi 470293069 2352 KCFLFDSDKF 2361
gi 298705754 2623 RCFQSDRSGF 2632
gi 301123185 1922 GCFVHDNDGF 1931
gi 514692958 2249 LCFANDRDGF 2258
gi 297829192 1759 NCFLHDTGsl 1768
gi 685313151 2056 NCFLHDIgsl 2065
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