2YRV


Conserved Protein Domain Family
RBB1NT

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pfam08169: RBB1NT 
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RBB1NT (NUC162) domain
This domain is found N terminal to the ARID/BRIGHT domain in DNA-binding proteins of the Retinoblastoma-binding protein 1 family.
Statistics
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PSSM-Id: 336946
View PSSM: pfam08169
Aligned: 32 rows
Threshold Bit Score: 118.85
Threshold Setting Gi: 779996098
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2YRV_A           8 LNDELLGKVVSVVSATeR---TE-WYPALVISPSCND-DI--TVK-KDQCLVRSFIDSKFYSIARKDIKEVd-ILNLPES 78
gi 965553504   162 EREEHIGRVVCVEGSEkKkqkDN-WFPGLVVAPTAQD-NV--PIHvKEEYLVRSFKDGRYYTVPKKEANEFt-REVGARV 236
gi 752866695   180 ETEPEIGKVVCVELGDkKk-kDN-WFPGLVVAPTAQD-TV--RIRvRDDYLVRSFKDARYYTVPKKEATEFt-KELVNKV 253
gi 1028665253  183 meekDIGKVVCVEANDkKkvrDN-WFPGLIVAPTSQS-SV--KTNiAEDYLVRSFKDGKYYTVPKKEITEFt-KEIGARV 257
gi 242010295   171 EKEADVGKVVCVELGDkKkvkDN-WFPGLVVSPNAQD-TV--QIRvKDEYLIRSFSDGRYYTVPKKEASEFt-REIGIKV 245
gi 642930274   164 gysnDIGRVVSVEATDkKrgkDN-WFPGLVVIPSAQP-TV--RINvKDEYLVRSFKDGRYYTVPKKEVSEFn-REMGEKV 238
gi 762129019   175 kNQELVGKVFLAEIGEkK---KQ-VLPVLVVLPDAHA-TE--LRT-KDHLLVKSFKDGKFHTYQRKELKDFs-KEAIAKI 245
gi 260830186   190 vkklvkckvlcvESTDkR---RN-WFPALPVNPSSADvKL--TRG-KDQIVVRSFRDGKYHVVNKEDTREFn-KEQAERI 261
gi 241748277   163 LPDWSVGRVGCLDVGDkRk-rDS-WVPVLVVSPSATG-SAggQLG-RDELLVRSFRDSKFFQVTKRELREFs-RDSSARV 237
gi 779996098   178 EPEDAVGKIVIVEMNEkR---KNsFFPALVVDPSCTK-DV--QTNrKDYIVARSFKDNKFYTVSRSSRKPFlsKDHTYKG 251
                           90       100
                   ....*....|....*....|....*
2YRV_A          79 E-Ls-T-KPGLQKASIFLKTRVVPD 100
gi 965553504   237 E-HptL-KAAVDKALLYLDCNELPP 259
gi 752866695   254 E-NstL-KVAVEKALLFLEKNELPP 276
gi 1028665253  258 E-NptL-KTAVEKALFFLDKDELPP 280
gi 242010295   246 D-NntL-KTAVEKALHFIDKDELPP 268
gi 642930274   239 E-SsvL-AEAVGKALKYLDHNELPv 261
gi 762129019   246 E-Dk-NaKQALERAVTFSEKQELPS 268
gi 260830186   262 E-SpsL-KPAIDLAIKYLDTGDVPA 284
gi 241748277   238 E-SnaL-RSAVDRALAFLDQRVLPP 260
gi 779996098   252 DvAs-L-KAANEKAVTFIDTGQLPP 274
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