Conserved Protein Domain Family
SspO

?
pfam08175: SspO 
Small acid-soluble spore protein O family
This family consists of the small acid-soluble spore proteins (SASP) O type (sspO). SspO (originally cotK) are unique to the spores of Bacillus subtilis and are expressed only in the forespore compartment of sporulating cells of this organism. The sspO is the first gene in a likely operon with sspP and transcription of this gene is primarily by RNA polymerase with the forespore-specific sigma factor, sigma-G. Mutation deleting sspO causes the loss of the SspO from the forespore but had no discernible effect on sporulation, spore properties or spore germination.
Statistics
?
PSSM-Id: 311896
View PSSM: pfam08175
Aligned: 8 rows
Threshold Bit Score: 45.3321
Threshold Setting Gi: 62287624
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 62287596    2 AKRKANHVIPGMNAAKAQGMGAGy----NEEFSNEPLTEAQRQNNKKRKKNQ 49
gi 182689569   2 TKRKANHVINGMNAAKSQGNGAG-----YIEDDQLVLTAEQRQNNKKRKKNQ 48
gi 62287624    2 AKRKANHVINGMNNAKRQGNGAG-----YIENDQHILTEAERQNNKKRKTNQ 48
gi 115502367 781 VPRKETHP-PGFGRPKSEENPREtg-rtYSEEAMPPVQQTEKYNGDKRKKNQ 830
gi 32699684    2 VRKKANHSRPGMNAAKAQGKDAGltsqfHAEIGQEPLNQAQRQNNKKRKKNQ 53
gi 71981657  781 VPRKETHP-PGFGRPKSEENPREtg-rtYSEEAMPPVQQTEKYNGDKRKKNQ 830
gi 502724274   2 TKKKSNHIIPGMNHASGQGKGTGynsqfNQESANEPLTEMERQNNKKTKKRQ 53
gi 503864366   2 TRQKANHIRPGMNTAKAQGKGAGy----NEEFSNEPLTEKERQFNKKRKKNQ 49
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap