Conserved Protein Domain Family
INO80_Ies4

?
pfam08193: INO80_Ies4 
INO80 complex subunit Ies4
The INO80 ATPase is a member of the SNF2 family of ATPases and functions as an integral component of a multisubunit ATP-dependent chromatin remodelling complex. This family of proteins corresponds to the fungal Ies4 subunit of INO80.
Statistics
?
PSSM-Id: 311902
View PSSM: pfam08193
Aligned: 42 rows
Threshold Bit Score: 180.626
Threshold Setting Gi: 326481245
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121792108  11 AKDRRKSAnstaptvVSAGSpkptqIVTLKVPAQKLRAILDpdf----ikeDt---------------------pAKQSP 65
gi 255954967   6 PNGRSRGA-------KNSSNs---lMVVLKLSGDTLQQFASpkikgqnntiKp---------------------nDHSSP 54
gi 629655545   6 sttistpaqnarpdktNKPSk----IVVFKVSPEKLGRFMPkpt----qrkNs---------------------kAKSTP 56
gi 303315791  11 TAGRSTKM-------NKKTKt----IV-LKLTSSLLNRFPGvat----pgdDq---------------------eAKSKA 53
gi 627800477   1 --mstsaatsksssktPRKSl----KVRLRLSPKILAKFPS-----------------------------------DITP 39
gi 684167708  20 ADKNKKQGk----------------IIILKLSPKLLRQFEEpta-----------------------------kpEEQST 54
gi 169782046   7 TNGRSSRS-------GPSSKg----VVVLKLSPDLLSRFASpp------ppEvkdrkksiikddesradspvkekEPSSP 69
gi 525584673   7 SNGRSNRA-------GITKNaspqlLVTLKLGPEVLQQFLEephdtsdtkt--------------pepsslpdkaEQSSP 65
gi 557722814  13 TNGRISRS-------EKPNSk---tVITLKLAPGLLGRFPSsfddken---------------------nrvkesNGSSP 61
gi 326481245  27 KTTNR--------------------IVVLSLPPALLGRFPRgcsgnase------------------dsqankedESSSP 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121792108  66 AA--------AAA-----------SG------T------ENASDSTPnsppagTPAAQSv-------tMG-PP----TE- 101
gi 255954967  55 AS--------STElptv----rpsS-------A------DNGSDADAi----sTPATGAt--------AGdTP----RRk 93
gi 629655545  57 SSvstptsapAAAsala----pasSP------N------GDASESNS------TPVPGAt--------EA-P------Kk 99
gi 303315791  54 SS--------SSPtssptpvgpsaAS------V------DNASEPRSspp---vaeAAAt--------AE-SS----KKk 97
gi 627800477  40 KP--------SIAtpai----eplSS------AqlhdatDKTSDSNg------TPMPAPsnetgdgntLA-PPkvdrRRr 94
gi 684167708  55 AS--------VGSsptpp--dedaSTlkvpeaN------DNASESNS------TPAPTPtdp---aaaDG-SK----KKk 104
gi 169782046  70 AS--------SSVeapi-------------------ppsDNASDAAS------TPAAGTs-------aAD-TP----RRk 104
gi 525584673  66 AS--------SVEapva----rpsAD------V------ESNADVTS------TPATGVt-------pGD-TP----RRk 103
gi 557722814  62 V---------STAdpap----pasSV-------------DNASDVGSa-----TPATMS----------E-VP----RRk 95
gi 326481245  69 ST--------PPAaplt----dnaSD------G------DAASTAAGpa--psTPSASVsgsa--aaaAN-GP----TSa 115
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121792108 102 -GLK---KK-GVKRSATAAangnGEP--KVRGKPGPKKKQRL-EDGTie-----------ggRGSLAa-----HKLGPKA 157
gi 255954967  94 gVPG---PKpGNKRTKEQ-----TDPsaKSRGRPGPKKKPRL-DEGEt--------------TKIPAa-----QRLGPKA 145
gi 629655545 100 kGTG---ARaGTKRAL--------DGaaKSRGKPGPKKKPRL-EDGTidhagkpigggggggGAVTNg----tHKLGPKA 163
gi 303315791  98 pGTP---SKtGTKRAAG------SDAgpKPRARPGPKKKARL-DDGTvds---------ngrSTGPTtt--gtHKLGPKA 156
gi 627800477  95 gGAG---ISsGRKRAPPSId---PNGpmRERGRPGPKKKPRFrPDGTidrsn-----dgtrpAPVTAp-----SRLGPKA 158
gi 684167708 105 gGAG------GAKRSLGQMm--eSNGtpKPRGKPGPKKKPRL-EDGSidhg--------ankGSVTTgpglggHKLGPKA 167
gi 169782046 105 gVPG---PKpGAKRGVNQI----SETtpKPRGKPGPKKKPRL-DDGGse------------pVKIAPs-----HRLGPKA 159
gi 525584673 104 gIPG---PKpGSKRGNGS-----SEPvaRVRGRPGPKKKARL-EDGSep-----------gkSSMAP-------RLGPKA 156
gi 557722814  96 gIPG---PKpGSKRGLHQV----GEVlpKPRGKPGPKKKPRL-EDGTid------------hSRLAPs----aHKLGPKA 151
gi 326481245 116 pASGsgaAKaGTKRGAQALg---PDGlpKPRGKPGPKKKPRL-EDGEtp------------sRPPPPp----hHRLGPKA 175
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121792108 158 NQGAINAGLRALDRSGKPCRKWSRGGFTLKTFTGVVWEIPRWTAPPKPRPe---eSADGSTAASE-----SSNKENkedn 229
gi 255954967 146 NTGAINAGLRALDRTGAACRKWERKPLQLRSFTGVMWQLPSWRTPGISKs-----DDSVDGKVAAmesgdSDTKPTlhap 220
gi 629655545 164 NQGAINAGLRALDRSGKPCRKWERKPIQLKSFTGVVWELPSWRAPKSKLPk---eESQESKdas----qpSGSKANdsst 236
gi 303315791 157 NQGAINAGLRALDRTGKPCRRWERKAFQLKSFTGTAWQVRSWRAPPRPKPadvtmTDANTAAATPaddtnANNKDNiass 236
gi 627800477 159 NTGNINANLRALDRSGKPCRRWERKPLHIKSFTGVMWGMPSWKAPQR----------DNGFAGDVksdstGSSDLKrnds 228
gi 684167708 168 NQGAINAGLRALDRSGKPCRKWVKKSFTLKSFTGVTWELPSWKGHERPGQv---nGEESSETKDIslqssSDVKPNesda 244
gi 169782046 160 NTGAINAGLRALDRSGAPCRKWERKSLQLKSFTGIQWQLPTWRTPRPQKT-----DDNGESKESVletgdSDSKANqsas 234
gi 525584673 157 NTGAINAHLRALDRTGAPCRKWERKSLKLRSFTGVIWQVPTWGSHKLAKA-----ESEENPTSTAltngdSDSK-Nlaap 230
gi 557722814 152 NQGAINAGLRALDRTGAPCRKWERKPFQLKSFTGVVWQVPTWRTPKPKK------EENGDSQNGVaetgdSDSKANnsa- 224
gi 326481245 176 NQGAINACLRALDRSGKPCRKWERKSFQLKSFTGVIWQVPSWGAPPRPKPtp-eeEEEKQKEKQAttngeKKDKEKdk-- 252
                        330
                 ....*....|....*..
gi 121792108 230 --------sqvkSEASN 238
gi 255954967 221 gtdtangssavpSEKSN 237
gi 629655545 237 ---------amdSEKSN 244
gi 303315791 237 ---------avaSERSN 244
gi 627800477 229 --------savgSDRSH 237
gi 684167708 245 ---------amdSNAgd 252
gi 169782046 235 ---------gvpSEKSN 242
gi 525584673 231 gtetrngssavpSEKSN 247
gi 557722814 225 ----------ipSEKSN 231
gi 326481245 253 -----------kSEKSE 258
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap