Conserved Protein Domain Family
DUF1720

?
pfam08226: DUF1720 
Domain of unknown function (DUF1720)
This domain is found in different combinations with cortical patch components EF hand, SH3 and ENTH and is therefore likely to be involved in cytoskeletal processes. This family contains many hypothetical proteins.
Statistics
?
PSSM-Id: 336963
View PSSM: pfam08226
Aligned: 66 rows
Threshold Bit Score: 33.1899
Threshold Setting Gi: 74641177
Created: 24-Mar-2017
Updated: 23-May-2017
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74657555    972 FQPQQTGFMAPNQFQNGLM----------------PQPTGFQPQSQfgiqqqqtgfGLAPQPTGfggf------------ 1023
gi 75200389    183 NQPSSTGLKQPILGQPSTSssvnqp----ltginqPL-TGFN----------------QPSSTGlnnpilg------qps 235
gi 205829275   213 MAPQGTGYPQTSFLQNQATgfa-----------qqP--TGFGQQAT----------GFGQQATGfgqq------------ 257
gi 205829280   545 LQPQTTGSMMPNLQPQTTGsmmp---------nlqSQTTGSMMP------------NLQSQMTGsmgvg----------t 593
gi 74690857    435 VQPQNTGSFVPQQQQQPVVqsq----------piaPQSTGGFGPPMpt------tfGIQPQSTGgfvqp----------q 488
gi 74690857    341 AQPt-GGFGQPQPTTFGQLq---------------AQVTGGFGQPQpt------tfGLQPQTTGgfvqaqqvtggiaqqp 398
gi 121925813   333 QAP--GGYTGPRPSMPPMP-------------------TGYGS-------------NLAPNQTGma-------------- 364
gi 74668517    373 NGPrpp---------------------------lpPMPTGFGSNLSsmq-----tgGLAAQPTGipgq------------ 408
gi 205829270   360 TQP--TGYNGPRPPMPPMP-------------------TGYGS-------------GLSPSQTGla-------------- 391
gi 1074718474  501 MAPNHTGYVHPQPTGLQRQttgytgnnnpysrplqSQSTGILQQQQqqs-----apRLEPTKTGsnnpf----------a 565
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 74657555   1024 gappQQPMPTGI----------------NSVLPPPLQP---QPTGM 1050
gi 75200389    236 tsssLNQPLTGF-----------------------NQP---SSTGF 255
gi 205829275   258 -sswLAPQATGF----------------NNSAPPPSTSfggTGTGI 286
gi 205829280   594 tsfgMQPQATGN---------------------ISLQP---NPTGF 615
gi 74690857    489 vtggLQPALTGNipqt---------sfgAQPFNQQLQP---QATGY 522
gi 74690857    399 smnpLTQQGTGF---------------------AQNQQ---GTGGF 420
gi 121925813   365 ---pLNAQPTGMpgqwglvnnpasglpnIEALAARMMP---Q-TGR 403
gi 74668517    409 -wgfVNAPSSGLp--------------nIEALKQQLMPqpgREGGF 439
gi 205829270   392 ---pLNAQPTGVpgqwgfvnapatglpnIEALQQRLMPqpgREGGF 434
gi 1074718474  566 qfsnLPSQSTAP-------------------ATKPMKP---VRTGD 589
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap