Conserved Protein Domain Family
SPT2

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pfam08243: SPT2 
SPT2 chromatin protein
This family includes the Saccharomyces cerevisiae protein SPT2 which is a chromatin protein involved in transcriptional regulation.
Statistics
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PSSM-Id: 311937
View PSSM: pfam08243
Aligned: 44 rows
Threshold Bit Score: 33.0225
Threshold Setting Gi: 634350293
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75216157   235 HQMMSKPALKRPPSRDIDHERrllkkk-kparsEDQ-----------E--------------------AFDMLRQLLPPK 282
gi 74582989   301 TSASSAITKPKARPHTSRHDEfv---------vSDD-----------Delnd------------rvpdVSSEIWKIFGKR 348
gi 1022840822 302 TKPARRARSVTPSDEDDESDMst---------sSTEqrkrkrsryekErgl--------------nsaQRDAIWSLMGRN 358
gi 575486740   40 HSSPPHKKPSSSAPNHYNLDEai---------lDSEfva---------------------------knTSSIIQQMFRRG 83
gi 406696631  291 SNKARRKSYSSDYDSEDSYDSpprk-----krrDAV-----------Eeps--------------rsaVSAMIQSMFSRG 340
gi 552834646  352 EARMQYNKRRLSLDSGGDLDSfi---------aSDE-----------Eegeegy--------aegdggEVEQDWRAALRE 403
gi 588258539  170 NRTSQKKNEQYSSSSDQDDDP------------DEE-----------Ainn---------------dyVGQDIWKLFGKD 211
gi 630179389  366 SSRSESPYPSRKRARSEELDDl-----------DHN-----------Ddfn--------------hskVSQMIWGIMGKR 409
gi 471897821  257 SKPSHSLPAKRRRSYDSESDSy-----------DSE-----------EddrerrrraarkapsagargAGFDIWSIINPG 314
gi 125540590  329 PSSRPKPSSAVHNDHGKGKTRrlvkrkskedgcDEE-----------Ev------------------dYKSIIRGMFNYN 379
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 75216157   283 ---------RFSRYDDDdiNMEAGFEDIQKEERRSARIAREEDERELKLLEEEERRERLKKN 335
gi 74582989   349 kqd---yvsRDVFSDED--DMEATGHDVWREEQAAARAARLEDELEEQRERERELAKKRRKN 405
gi 1022840822 359 rha---dvaRERAFDSDdsDMEATGADVLLEERRAARLAAKEDAEEQERLRRYAEEKKKRKi 417
gi 575486740   84 gsnatgssrQYGLDSDSgsDMEVGFSTLDREEKQSARIAKREDAEEERLQQETERRLSIKRR 145
gi 406696631  341 re------pRQVYDDYDsdDMEAGLEDVEAEERRALKLAKLEDQKEEALEAQrkaekerrar 396
gi 552834646  404 atggydpskFAAIDRQAdrDMEAAYGQIQAEERRAARIARAEDEREAEREALREAAKRERKR 465
gi 588258539  212 ksk---yleRDYNSDESdvGMEATNEDVLHEELKSSRFGKQEDEKEAADLRRHELEKKRKRl 270
gi 630179389  410 ksd---ytsRDIFSDEDesDMEAGASDLEREEKRSSRIAKKEDLLAMEEEKRREEEKKQRKR 468
gi 471897821  315 ksrteylsrDVVSDDED--DMEATGRDLEREEKQSARIAKQEDAEAEAEERRREEAKRRKKM 374
gi 125540590  380 p-------aKFVGRDEDdrDMEANYASIQMEERRSARLARQEDDEELRRIMDEERREKQERK 434
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