5AJ3


Conserved Protein Domain Family
MRP-S33

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pfam08293: MRP-S33 
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Mitochondrial ribosomal subunit S27
This family of proteins corresponds to mitochondrial ribosomal subunit S27 in prokaryotes and to subunit S33 in humans. It is a small 106 residue protein.The evolutionary history of the mitoribosomal proteome that is encoded by a diverse subset of eukaryotic genomes, reveals an ancestral ribosome of alpha-proteobacterial descent that more than doubled its protein content in most eukaryotic lineages. Several new MRPs have originated via duplication of existing MRPs as well as by recruitment from outside of the mitoribosomal proteome.
Statistics
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PSSM-Id: 336988
View PSSM: pfam08293
Aligned: 111 rows
Threshold Bit Score: 54.4215
Threshold Setting Gi: 74855039
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5AJ3_i         6 EYAVRMSRLSARLFGEVARP-TDSKSMKVVKLF---SEQP---Lakr-keTYDWYPNHNTYFALMGTLRFlGLYRDEHQD 77
gi 74964004   22 PFGKRMDRLSNRVWGEVVMP-TDTKSLKVVRVM---SAEP---YetkeqlSPKYYPNLPMFHYLTKMLRFhGLFFDDHVV 94
gi 339238083  27 vYSRKMDRLSKRIFGEIPYElTARN-ARVVKAF---QAMP---Yeed-efCIAYFPPHPMFHSLTKLLRLhGLFRDEHQD 98
gi 156363707   4 NYARKMALLQARIFGKLTRPvTKQ-SYKVVTHF---SRRPlggA------INSYYPPLKQFNSLLLRLRHlGFYRDDHLD 73
gi 312065207  44 EYGRHMHDLSRRIFTEPQRt-TASKNLKVVRIM---SEEP---LeqqsfkTIDYYPNQPMFHYLTKMLRFhGLYFDEHVE 116
gi 358331746  67 SYAKRMTLLAGRIFLDVGRP-VDQKSKKVVSLM---QSRPppvI------HHNYYPPLEEYHNIFVKLRYlGLFRDEHAD 136
gi 196000114   4 gHVRNISRLRAKIFGRLPFk-TDPKSYKVVKAFrqqPKGP---Q------IVEYTQPIQRFNSLLLRLRHmGLYTDEHLD 73
gi 242017746  13 PYNERISRLRNRIFGDPL-TkRQQESMRVVKLF---SEKP---Lykr-teVVDYYPKYGIIEELMVYLRRyGLYRDEHKD 84
gi 541047791 352 PYGRRMDRLANRIFNEVSRP-TDTRSMKVVTVM---SAEP---LeqrddkSVGYYPNQPMFHYLTKMLRFhGLFFDDHVV 424
gi 674572849   7 VYSKRIALLASRIFGDTSST---YPPPKVVRVM---SELP---Eai---kIRDWYPPLEEYSEILATLRQvGLFRDEHAD 74
                         90
                 ....*....|....*....
5AJ3_i        78 FRDEQLRLKKLRGKGKPRK 96
gi 74964004   95 FRDVQDNLKIIRGKVVRPP 113
gi 339238083  99 FIDELLRQRCLRGKAPPKP 117
gi 156363707  74 FKEEMAVRRKERGKGPPKK 92
gi 312065207 117 WREVQNRLKLARGKmlypp 135
gi 358331746 137 FRDEMRRLRELkgkgkrkk 155
gi 196000114  74 FIDENEQKRRLKGKVPPKK 92
gi 242017746  85 FVEHMEKVRLARGKPKWKP 103
gi 541047791 425 FRQVQDELKLLRGKVIRPA 443
gi 674572849  75 FRDEMDRLRALRGKKKWVK 93
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