Conserved Protein Domain Family
DUF1725

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pfam08333: DUF1725 
Protein of unknown function (DUF1725)
This family include many eukaryotic and one bacterial sequence. Many of its members are annotated as being putative L1 retrotransposons or LINE-1 reverse transcriptase homologs. The region in question is found repeated in some family members.
Statistics
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PSSM-Id: 311990
View PSSM: pfam08333
Aligned: 14 rows
Threshold Bit Score: 31.4884
Threshold Setting Gi: 48474722
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10
                  ....*....|....*...
gi 74984013    82 FLGKWMDLEDIILSEVTQ 99
gi 81865433    43 IHGKWMELENIILSEETQ 60
gi 81864000    21 FIGKWMELENIILSKVTQ 38
gi 81864225   169 FAGKFEELENILNENITi 186
gi 81870798   125 FIGKWNELENIILKNHad 142
gi 48474722    62 FIGKWMELEYIILSEFCE 79
gi 81865433    21 FVGKWLELENIILSELTQ 38
gi 432099533  120 FATAWMDLESIMLSEISQ 137
gi 959241373   28 FVGTWMKLETIILSKLSQ 45
gi 148645276 1240 FAATWMELENLILSEMSQ 1257
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