Conserved Protein Domain Family
IF2_assoc

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pfam08364: IF2_assoc 
Bacterial translation initiation factor IF-2 associated region
Most of the sequences in this alignment come from bacterial translation initiation factors (IF-2, also pfam04760), but the domain is also found in the eukaryotic translation initiation factor 4 gamma in yeast and in a hypothetical Euglenozoa protein of unknown function.
Statistics
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PSSM-Id: 312015
View PSSM: pfam08364
Aligned: 100 rows
Threshold Bit Score: 32.482
Threshold Setting Gi: 505085348
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 166232550  68 PKKITLK----RR-SHSQLKMP--AGRdagsrgprqTRTVNVEVRKRRTYVKR 113
gi 122314887  12 RRPLSLK----RS-GGGTVQQSfaRGR---------SKAVVVEKKRKRVATPa 50
gi 238690152  16 RQPLTLKpraaGSvSSGTVKQSfsHGR---------TKTVVVETKRARTHAPA 59
gi 123765880  15 KKTLTLKp---SGmSQGTVRQDmgRGR---------TKAVVVETRKRRPMrpe 55
gi 123094457   7 KKPLGLS----GGaRSGRVNQSfsRGR---------TKSVVVETKRKRVMVPK 46
gi 189028316   7 KKTLGLR----GGsRTGQVKQSfsHGR---------TKNVVVETKRKRVLVPK 46
gi 529582650  11 KKPLGLGg---GAgRSGSVKQSfsHGR---------THNVVVETKRKRVVVPg 51
gi 505085348  15 KKTLTLKv---SSvSKSSVRQNvnQGR---------VKSVVVETRKRRPHrqe 55
gi 494821338  15 KKTLTLRtp-sSSiNHSIVQKN--KGR---------PRSVVVETRKRRSYVQG 55
gi 518931764  17 RKPLSLQ----RTvESGHVRQSfsHGR---------SKSVVVEKRKTRKLAap 56
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