5ME0


Conserved Protein Domain Family
IF2_assoc

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pfam08364: IF2_assoc 
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Bacterial translation initiation factor IF-2 associated region
Most of the sequences in this alignment come from bacterial translation initiation factors (IF-2, also pfam04760), but the domain is also found in the eukaryotic translation initiation factor 4 gamma in yeast and in a hypothetical Euglenozoa protein of unknown function.
Statistics
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PSSM-Id: 337023
View PSSM: pfam08364
Aligned: 98 rows
Threshold Bit Score: 31.7097
Threshold Setting Gi: 505085348
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
5ME0_W         56 PDKLTLQ-RK-TRSTLNIpgtGGKSKSVQIEVRKKRTFVKR 94
gi 172048015   17 GKTLTLK-RPvEQGTVRQsfsHGRSKSVVVEKVKRRVFAPg 56
gi 123765880   15 KKTLTLKpSGmSQGTVRQdmgRGRTKAVVVETRKRRPMrpe 55
gi 123094457    7 KKPLGLS-GGaRSGRVNQsfsRGRTKSVVVETKRKRVMVPK 46
gi 189028316    7 KKTLGLR-GGsRTGQVKQsfsHGRTKNVVVETKRKRVLVPK 46
gi 503420357   16 RKTLGLKrGGvEQGTVRQsfsHGRSKAVVVEKKKRRIVVPg 56
gi 529582650   11 KKPLGLGgGAgRSGSVKQsfsHGRTHNVVVETKRKRVVVPg 51
gi 505085348   15 KKTLTLKvSSvSKSSVRQnvnQGRVKSVVVETRKRRPHrqe 55
gi 968342406   17 PKPLGLK-RPiEAGTVRQsfsHGRSKQVVVETVKRRVIgaa 56
gi 518931764   17 RKPLSLQ-RTvESGHVRQsfsHGRSKSVVVEKRKTRKLAap 56
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