Conserved Protein Domain Family
CCDC50_N

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pfam15295: CCDC50_N 
Coiled-coil domain-containing protein 50 N-terminus
Statistics
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PSSM-Id: 317668
View PSSM: pfam15295
Aligned: 16 rows
Threshold Bit Score: 110.881
Threshold Setting Gi: 198415484
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 91079776     8 DNEALPkgRVTEVCQEWMVREDGALAYRLQNQEITEHLSGNKYRNALVREDFPRAKSEQLREQqlaEQTALIYQRMLAEQ 87
gi 187607680    7 DKSNLP--RVNDVCRDFAVLEDGALAHCLQEQEIEQHYASNIRKNKLVQKDIRIAKKLQDEED---LQCKVFSIEKQKEI 81
gi 1005954707   7 TEEDIPegKVNQVCREWLVREDNAIAYRLQDEEINQFYEGNRYKNQVFRSDLEQARYIHENEE---FERMMEFEREKQRL 83
gi 198415484   10 EQEPVR--PVTEAVQEYRVIEDGALAYHLQEREIEHHYACNVENRRTVMQDIRTAQQLQDEED---RRARIFTLEQQAQL 84
gi 541045244    5 atEHIE--PVHKVASRLRSYEDFNMAQRLQDEEFGRHYALNRMERRRMGIDLRKSLREQAIED---RIAAECRAQQNNCI 79
gi 768914843    8 DQTNLP--RVQEVCQCFSVLEDGALAHNLQEQEIEQYYSTNIQKNQLVQNDIRVAKKLQDEEEeqwAQQSALHRQVSKQL 85
gi 55250090     7 DQSNLP--RVQEVCQCFAVLEDGALAHNLQEQEIEQYYSSNVERSQLVQRDIRVAKRLQDEEQ---QRVQTPQHQTTRQL 81
gi 528494874    7 DKSHLP--GVYDVCQCFSVLEDGALAQSLQEQEIEHFYSTNIQKNQTVQNDVRLARRLQEEEE---------ERANLQQI 75
gi 765125939    7 DQSNLP--RVHEVCQTFAVLEDGALAHNLQEQEIEQYYSTNVQKNQLVQNDIRLAKRMQDEEEeqqAQQSALLRQASRQI 84
gi 658859601    7 dqSNLP--RVQEVCQTFAVLEDGVLAHSLQEQEIEQYYTTNIQKNQLVQNDIRVARRLQHEEEqqrAQQSALFRQVSRQM 84
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 91079776    88 EEQDNQVAKQLAeELER----E-E----RQKRRFIEIQDQNVARQLLHRERVSVER 134
gi 187607680   82 EELDSEYARVIQ-EELQ----R-K----AQECLQREEEDKEIAKRLQQLEEEELHR 127
gi 1005954707  84 ADEDERIAKEIQ-EALLeeerR-K----AEELNIIAEEDEKLALRLQekekerlkr 133
gi 198415484   85 EKTDEKLAEAYQ-EKLL----K-KhlqkEQERKEREERDNEIAFMLMererrrerr 134
gi 541045244   80 AEIDEAIAHRLQ-LEFE----ReE----ALKKESQARLDAELARRLQLDEEIQRQE 126
gi 768914843   86 EERDFEYARLIQ-EEIL----R-C----AEEAQRREQDDEEMAKRIHDEETQCRRR 131
gi 55250090    82 EERDSEYARMIQ-EEIQ----R-C----AEEARRREVEDEEIAKRIQEEELCLRHR 127
gi 528494874   76 EEEDCRYALMIQ-QQLQ----R-C----AEEARRQEKQDEEIAKQLQEEEEMEMRR 121
gi 765125939   85 EEQDLEYARVVQ-EELQ----R-S----AEEVRRREQHDAEIAKRLQEEEEQWMRR 130
gi 658859601   85 EEQDFEYARVIQ-EELQ----R-R----AEEAHRREQDDEEIAKQLQEEEEEQVRR 130
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