Conserved Protein Domain Family
DUF4642

?
pfam15484: DUF4642 
Domain of unknown function (DUF4642)
This family of proteins is found in eukaryotes. Proteins in this family are typically between 115 and 196 amino acids in length.
Statistics
?
PSSM-Id: 317835
View PSSM: pfam15484
Aligned: 15 rows
Threshold Bit Score: 196.184
Threshold Setting Gi: 395829827
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81895588   50 CYRGHNHEEPLKTLCT----GEGC--V--AANAEMDKPEDQDK-VLMHFLNMGLPMKPSILVQKQSKEEMATSLGDNIKA 120
gi 269849707  39 CFQGRKGKETKKVPCTdangGVDC--A--AAKVVTSNPEDHER-ILMQVMNLNVPMRPGILVQRQSKEVLATPLENRRDM 113
gi 532072836  44 CFQGKR-EETEKIPCTdangGEDC--S--PANVE-DNTGGQEK-VIMEIMGMNEPVRHGILVQRRNKEAVATSLENREDT 116
gi 157818849  50 CYRSQSFEEAMRPLCTgendDENC--L--AVNTQMSRPEVNDK-VLLHFVNMNMPVRPGILVQRQNKKEMATSLGD-IKT 123
gi 884907503  26 SFQDKKDEVTGKSPCAd--gGADC--SpsAADEETYDAGDHEK-IIVQIMDSDEPVRPGILVQRQNKD---TSLGSTEDT 97
gi 431912664  39 CSQSKKDDETEKGPCg----GRDC--F--AANVETNNSKDQEKtVIRQI------MRPGILVQRRSKEMVATHLENREDT 104
gi 426226340  39 CSQSRTDEETEKGPCTen-eDEGC--P--AANTEMKDLDDQEK--------TLAPARHGILVQRRTKEAMTTPLGNREDV 105
gi 311252555  39 CAQSRTDEETEKGPCTdangGEDC--T--VANTEMINLEDQEK--------TLVPMRPGILVQRRVKEATGT-LGNGEEV 105
gi 664752070  31 kcvqsTDEETEKYPCTdanrDEDC--L--AANVETDNSGDKDK--------TLTPMRPGILVQRQSKEVLATPLENRGDV 98
gi 351712634  13 SFQDKKDEVTEKIPCIdangGDDCssS--PAN-ETNEAGDQEK-ILMQIIGSNAPVRPGILVQRQNK--VVTSLGNREGT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81895588  121 E---DYQKKQTYEPVNARETNHEGEL-AEKMPIHVHRSSD-TGSQKRPLKGVTFSKEVIVVDLGNE-YPTPRSYAREHKE 194
gi 269849707 114 EaeeENQINEKQEPENAGETGQEEDDgLQKIHTSVTRTPSvVESQKRPLKGVTFSREVIVVDLGNE-YPTPRSYTREHKE 192
gi 532072836 117 EaqeGDKMKKKQVSGNAGETDQEGEK-LKITHLPLNRVSSdVENSKRPLKGVTFSREVIVVDLGNE-YSAPRSYTREHKE 194
gi 157818849 124 E---EYRNRQTYEPAISRETKHEGEF-AEKIPIHVHRTPT-DRSQKRPIKGVTFSKEVIVVDLGNE-DATPRSYAREHKE 197
gi 884907503  98 EteqEDKTKGRQ----AGEVNQKGDN-FNK-----TLRSSvTESQKRPLKGVTFSKEVIVVDLGNE-HPAPHRYTIKHKE 166
gi 431912664 105 KdeeEGKIKEKQDPENAGENSQKDDD-LQKPHIPVTGTLSvVDN-KRPLKGVTFSREVIVVDLGKE-YPTPRSYTVEHKE 181
gi 426226340 106 EgeeENKIKEKQKPENARENGQEDDY-LQNPLIPVTGSSSvVDNHKRPLKGVTFSREVIVVDLGKD-NPMARSYTRLHKE 183
gi 311252555 106 EdeeEDKIKEMQKLENAGENHQENDY-LLKPPIPVTGSPSvIDNHKRPLKGVTFSREVIVVDLGKD-NPIARSYTRLHKE 183
gi 664752070  99 EdgeVAKIKEKQKPENAGENVQEDDD-LQKPPIPVTGTPSvVDNQKRPLKGVTFSREVIVVDLGKD-HPVSRSYTRMHKE 176
gi 351712634  87 EaekEVKMKDRQGPEDSGEVNQEDEN-LQE-----TLIPSvTESQKRPLKGVTFSREVIIVNLGNEqHPAHQRYAQEHKE 160

                 ..
gi 81895588  195 RK 196
gi 269849707 193 RK 194
gi 532072836 195 RK 196
gi 157818849 198 RK 199
gi 884907503 167 RT 168
gi 431912664 182 RK 183
gi 426226340 184 RK 185
gi 311252555 184 RK 185
gi 664752070 177 RK 178
gi 351712634 161 RR 162
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap