Conserved Protein Domain Family
PRTase_3

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pfam15610: PRTase_3 
PRTase ComF-like
This PRTase family is related to the ComF PRTases. These genes are found in the smaller biosynthetic operon associated with the Ter stress-response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress-response.
Statistics
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PSSM-Id: 317925
View PSSM: pfam15610
Aligned: 12 rows
Threshold Bit Score: 294.631
Threshold Setting Gi: 753933660
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121747025   2 VCDVFSLHKI--SggDGVKFPFPVKDYQRYVFGDDKLAHLFGTDLAKAFIARTGAAEDTstgsn-qelttDVVVAVLSD- 77
gi 502445821   1 MKDVYALHSI--V--DDAHFPFDPAAYSCFKFGDGAVAEAFGTALATGFIATYGDRLSE-----------NEQLVVLPSp 65
gi 503848695   1 MNTRFSLHKI--I--DKDQYPFDPKAYSWFKFGDKKYAQEFAYDLFQAFISNYKEVLLK-----------HDEIVILPSp 65
gi 396459962   2 VPEVCSLYQFagE--GNTPYPFSIQDYQRYVYGDDKRAHQFGTDLAKAFIATRTSNQSFt---------hDIAVAVLSD- 69
gi 827077221  52 IKDTLVLYYI--E--DEAKPGFNKYDYSRFKYGDTRFASQYGQEMANLAWKQLIKPILDkdras-hrpltRFATMVSQG- 125
gi 636587731   2 VRDVFALHAI--VagDDMRFPFSLRDYQRYIFGDDRVAHRLGTDLAKAFIPTISSPPL------------DFAVAVLSE- 66
gi 628053785   2 VQDVFSLHSI--VadDKLRFPFSLKDYQRYIFGDGRLAHRFGTDLAKAYIPTLPGPID------------DFAVAVLSD- 66
gi 189209173   2 IQNVVSLHNI--TggDAVKFPFSPADYQRYVFGDDRLAHRFGRELAKVFIPTICNSRD------------DFAVAVLSE- 66
gi 753933660  85 GSDATALAGI----------------YSRAKYGGVHDIRYLARQLIDYLCGELDRPDSQwsylfqnakvcGDNVVMMTTg 148
gi 495787087   1 mlATYSLHHI--D--NANYFGFNPDDYSRFKFGDEAVAKTYGTSLAEGFIQNCLVRQSI-----------EQQIVVISSp 65
gi 506287985   2 IPYTYSLHKI--H--HSNNFGFSADDYSRFKFGDDRVAKKFGKDLADGFIKGFLEDNQI-----------SEQIVVISSp 66
gi 489079173   1 MINRYSLHQI--N--NSEAFTFNPADYSVFKFGNIALAEQFAKELFQGFIAQYSDTVL------------DEEIYIFPSp 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121747025  78 --HVPTATHNLREHFTAYLNRHLVSEKQRPAHKIDLIRvtARDD-------PHTSRTST-----YHVDLACL---GSRAL 140
gi 502445821  66 ytTIPTASYHMTTAFVKMLNRYLCMRGYNPADTAKIHR--YKTYsidygalDMESRKALiindkYHLDKEFL---AGKTL 140
gi 503848695  66 ylSIPTASNFLCYYFKKELNQFLFHHHKKASLESKIYR--NQTYvtdygnlNFEDRVQLisndtYYVDSNFI---KNKLC 140
gi 396459962  70 --SIPTATHGLRRHFVAYLNRHLISLNARPVLTIDVFS--Vgqda---gvlQDVTKENSkd--lYHIDVTRL---AGRSL 137
gi 827077221 126 --SLPTAATTFESAFCQYLNRYLAAEGAYAVLSVPILKatSASQsgdyatmSDADRENLmnnehFTFDRQAI---EGMVV 200
gi 636587731  67 --KVPTATHSLRNHFVAYLNRHLIANNAAPALKLDFHHvgASAKkarggppPATATAAV-----YHIDTQRL---QNRTL 136
gi 628053785  67 --QVPTATHSLRDHFVAYLNRHLVANNATPALKLDFHHagLSAElarvgppASTI---------YHIDTKRL---QNRTL 132
gi 189209173  67 --KVPTATHSLRDHFVAYLNRHLIANNASPALKIDFHHvgSNTKlr---ngPSTSKRNA-----YHIDTERL---QDRTL 133
gi 753933660 149 wrNVPSTANVLYEFVVEEVNVKLAHMALPTIINVKLPR--IAPPcedyaslSTEERERVnlvqdHVIPAENFyrwSGVHL 226
gi 495787087  66 fsFIPTATFALKTWFVCHLNRWLARHGYQVVQETKVHR--TVTYkedygelDAEQRISLigndlFHIDKDFL---TNKTL 140
gi 506287985  67 ycFIPTATFAMKNYFVYQLNHWLVENGRMVVQEAKVHR--TITYkddygalSAEDRIKLigndsFHIDKDFL---RDKVL 141
gi 489079173  65 ymAIPTASNYLCYYFKLELDRYLYLKQRPSSKLGKIHR--NQTYtvdygnlSFEDRKKLiandtYYIDKELL---KDKLC 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121747025 141 IILGDIRMSTEQEEAISNSFKSKKIEN---TIVFAYLATLDESVN--TSALSSTLSSIVSPSIKD--IDSLAHSRYFSMT 213
gi 502445821 141 IFTDDIRITGSHELIIRNLLKKFGLSN---DAYYLYYAQLQNQDI--HPNIENKLNYYSVHSLQS--LEAVIGSSSFRFN 213
gi 503848695 141 LFLDDIKITGSHEHTVNKILNQYQVKG---DFIFIYFAELINKEI--HPKIENFYNYYAVQNLHD--IINIINRPTFQYN 213
gi 396459962 138 IVLGDIRTAHTREDHMTQSLRNLNLDN---PIVFAYIAAVEGLQH--TAGLTSLMALIVGPTIKD--IETIAQAANFTMN 210
gi 827077221 201 LNLDDIYITGGHERAIRRTFQEEAAAGrhhDVYYLYIAKLANPKI--DPAIETRLNEVAVPQFKD--FKSIIEGPMFIIE 276
gi 636587731 137 IVLADIRTGQDREDRIRASFAVQGI-----TTVFAYLAALDDAAA--TPQLSTFLSSVVSPSIKD--IESIAQGPSFVMN 207
gi 628053785 133 IVLADIRTSQDREDEIRRSFAVQGI-----TTVFAYLAALSDSAT--TVALSNLLSSVISPSMKD--IEAITQRPHFFMN 203
gi 189209173 134 IVLADFRTGQAWEDLVRSSFGARGV-----TTIFAYLASLDQSTT--TTALTKFLSSVISPSMKE--IQNISQPPNFVMN 204
gi 753933660 227 IFGDDVLVTGSTADKVL----YESMRNgakSFRAIYPVAIDPRVAlgDASVEDRLNSVVVEQRLDdtVAELLSARDYQPI 302
gi 495787087 141 IFLDDIKITGSHERMIMKMVGNYQLDN---DIYMLYFAELVNKAI--HPNIENYLNYHQVKSIFE--LDPIIKSGSFAIN 213
gi 506287985 142 FFLDDIKITGSHEKMILKMVKEYELKN---DIYMLYFAELANHDI--HPNIENHLNYHKVRSVFD--LDEIIKSGNFCFN 214
gi 489079173 140 IFLDDIKITGSHEYTVKKILDTYKVEG---TFLFLYYAEVVNLAI--DPKIENFFNYYTISDANA--LVELINSEAFKFN 212
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 121747025 214 EAFARFVLSR-DYAEFCRFLR--GQDDFLARKLLDYAIGGDHLE-DELYKNNLRFL 265
gi 502445821 214 TRVVKFILNA-PFAEYEKLLM--KQTHGFLQELADCCIGNNYHQ-MEEYRNNANFL 265
gi 503848695 214 TRIVKYILNL-NQDSFQTLIN--AIGENQKKELFHLAISNNYHQ-ITDYKTNIQSI 265
gi 396459962 211 QSFVHYLLGR-DYAGFCSFVR--RQDDFFARLLLDYAIAGLYYN-DEDYRQNFDFL 262
gi 827077221 277 NRFVKRMLKA-GSAELKGLLSslNQGKDFAGRLYDAAIMNDFHMgGNAYKPNLKLV 331
gi 636587731 208 ECFVKFILER-DDVEFCQFIR--RQDDHFARLLLDHAINSHYHD-DDEHKGNVRFL 259
gi 628053785 204 QCFVKFILER-DNVDFCQFIR--RQDDHFVRLLLDHAIYSNYYN-DEEHTDNIRFL 255
gi 189209173 205 ECFVKFILGR-EYSEFCPFIR--RQDDHFVRLLLDHAINGHYHD-DQEHAHNVQFL 256
gi 753933660 303 LRTLRLLFGEgNRESLAAFLP--KVPAPTWLRLYKAALGNEFLS-QPQCAPSLVLL 355
gi 495787087 214 TRIVKYILNY-DFDSFRIFIE--NQTSAFVDLLYDMALGNGYHT-IEAYAKNLNFI 265
gi 506287985 215 TRIVKYILNC-DFNSFSIFLE--RQTEDFIYNLYNLSLGNSYHT-IDCYSGNLNFL 266
gi 489079173 213 TRVIKYILNL-DHSSFKNVVT--LLPEPKKQELFDLAISNDYHL-IEEYQSNLNKL 264
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